New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 102443242 (0.740)4 (0.070) 4/250 NT 8.7% coding (715/1380 nt) opdP glycine‑glutamate dipeptide porin
?NC_002947 = 1024441 43 (0.780)coding (706/1380 nt) opdP glycine‑glutamate dipeptide porin

GTCTTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1024281‑1024432
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGCACCGCCGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCGCAGTGCTCAGCCTGAGCACCGGCCTGA  <  NC_002947/1024441‑1024294
                                                                                                                                                                                                                                                                                                            
GTCTTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGAT                                                                                                                                                         <  6:133554/149‑1
   TTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCC                                                                                                                                                      >  2:190266/1‑149
                 GCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCCAGCACCGCCGGCA                                                                                                                                         >  7:286138/1‑148
                                                                                                                             GCTCTTGAACGGCTGGTAGTTGATGCCGGCGGTGCTGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCG                             >  8:286138/1‑148
                                                                                                                                     ACGGCTGGTAGTTGATGCCGGCGGTGCTGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAG                                                                                 <  3:44018/88‑1
                                                                                                                                     ACGGCTGGTAGTTGATGCCGGCGGTGCTGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAG                                                                                 >  4:44018/1‑88
                                                                                                                                                       CAGCACCGCCGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCGCAGTGCTCAGCCTGAGCACCGGCCTGA  <  1:355585/149‑1
                                                                                                                                                                                                                                                                                                            
GTCTTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1024281‑1024432
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGCACCGCCGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCGCAGTGCTCAGCCTGAGCACCGGCCTGA  <  NC_002947/1024441‑1024294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.