New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1024432 | 42 (0.740) | 4 (0.070) | 4/250 | NT | 8.7% | coding (715/1380 nt) | opdP | glycine‑glutamate dipeptide porin |
? | NC_002947 | = 1024441 | 43 (0.780) | coding (706/1380 nt) | opdP | glycine‑glutamate dipeptide porin |
GTCTTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1024281‑1024432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGCACCGCCGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCGCAGTGCTCAGCCTGAGCACCGGCCTGA < NC_002947/1024441‑1024294 GTCTTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGAT < 6:133554/149‑1 TTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCC > 2:190266/1‑149 GCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCCAGCACCGCCGGCA > 7:286138/1‑148 GCTCTTGAACGGCTGGTAGTTGATGCCGGCGGTGCTGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCG > 8:286138/1‑148 ACGGCTGGTAGTTGATGCCGGCGGTGCTGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAG < 3:44018/88‑1 ACGGCTGGTAGTTGATGCCGGCGGTGCTGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAG > 4:44018/1‑88 CAGCACCGCCGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCGCAGTGCTCAGCCTGAGCACCGGCCTGA < 1:355585/149‑1 GTCTTGTAGTAGTTCAGGCCGGTGCTCAGGCTGAGCACTGCGCTGTCGCCGAGCACATGGTTGGCGCCGAAGTAGTACTGGTTCCAGAAGTCCTCGACCTTGGTGGCGTACAGGCTGGTACTCAGGCTCTTGAACGGCTGGTAGTTGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1024281‑1024432 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGCACCGCCGGCATCAACTACCAGCCGTTCAAGAGCCTGAGTACCAGCCTGTACGCCACCAAGGTCGAGGACTTCTGGAACCAGTACTACTTCGGCGCCAACCATGTGCTCGGCGACAGCGCAGTGCTCAGCCTGAGCACCGGCCTGA < NC_002947/1024441‑1024294 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |