| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1105875 | 57 (1.010) | 3 (0.050) | 3/250 | NT | 6.0% | coding (355/1326 nt) | hisD | histidinol dehydrogenase |
| ? | NC_002947 | = 1105936 | 38 (0.690) | coding (416/1326 nt) | hisD | histidinol dehydrogenase | |||||
GATTGACGACCTGATCCTCGATCGCGCGCGCCTGGAACTGGCGCTGACCCGTATTACCCCGGTCCAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1105724‑1105875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCGAGCACGGTGCCGTCGGCCTCGGTGTACT < NC_002947/1105936‑1105861 GATTGACGACCTGATCCTCGATCGCGCGCGCCTGGAACTGGCGCTGACCCGTATTACCCCGGTCCAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGG < 1:64758/149‑1GATTGACGACCTGATCCTCGATCGCGCGCGCCTGGAACTGGCGCTGACCCGTATTACCCCGGTCCAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGG < 2:312690/149‑1 GCTGACCCGTATTACCCCGGTCCAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACC > 4:117200/1‑149 GCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCGAGCACGGTGCCGTCGGCCTCGG < 4:277389/149‑1 GAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCGAGCACGGTGCCGTCGGCCTCGGTGTACT < 3:117200/149‑1 GATTGACGACCTGATCCTCGATCGCGCGCGCCTGGAACTGGCGCTGACCCGTATTACCCCGGTCCAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1105724‑1105875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgCCCGGCACATACAGGCCAGCACGGTCCAGCGGGGTGACCTTCTGGCCGAGCACGGTGCCGTCGGCCTCGGTGTACT < NC_002947/1105936‑1105861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |