New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1105875	57 (1.010)	3 (0.050)	3/250	NT	6.0%	coding (355/1326 nt)	hisD	histidinol dehydrogenase
	?	NC_002947	= 1105936	38 (0.690)					coding (416/1326 nt)	hisD	histidinol dehydrogenase

CAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCATCGCTGGT  >  NC_002947/1105788‑1106078                                                                                                                                                     |                                                                                                                                                cAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGGGCGCACTCATCACGAGCGGCAGAAGCAGGATTCCTGGCAGGACACCGAGGCCGACGGCACCGGGCTCGGCCAGAAGGGCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCggg                                                                                                                                                 <  8:257287/149‑1 (MQ=255)      cgAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCa                                                                                                                                            <  2:100617/149‑1 (MQ=255)         ggCCCTGGAAACGGCCGCCAACCGTGTGCGCATTTATCCCGCGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAg                                                                                                                                          <  8:336471/148‑1 (MQ=255)           cccTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGcg                                                                                                                                       >  5:105456/1‑149 (MQ=255)            ccTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCATGTATGTGCCGGGCGGCAAGGagt                                                                                                                                      >  4:86568/1‑149 (MQ=255)             cTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGcgtc                                                                                                                                     <  1:286776/149‑1 (MQ=255)                gAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTa                                                                                                                                  >  8:269032/1‑149 (MQ=255)                gAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCAGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTa                                                                                                                                  >  3:237884/1‑149 (MQ=255)                      gccgccAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCcgtc                                                                                                                            >  4:132202/1‑149 (MQ=255)                           cAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCgg                                                                                                                       <  7:269032/149‑1 (MQ=255)                             aCCGTGTGCGCATTTATCTCGAGCGGCAGAATCAGGATGCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGGCAGATGGTCACCCCGCTGGACGGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTg                                                                                                                     <  8:158510/149‑1 (MQ=255)                             aCCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTg                                                                                                                     >  6:209674/1‑149 (MQ=255)                                         tttATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGcc                                                                                                         <  1:323803/149‑1 (MQ=255)                                            aTCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGcc                                                                                                         >  5:157643/1‑146 (MQ=255)                                            aTCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGcc                                                                                                         <  6:157643/146‑1 (MQ=255)                                                      gCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAgg                                                                                           >  5:337553/1‑149 (MQ=255)                                                           aGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTTTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGcc                                                                                      <  3:132202/149‑1 (MQ=255)                                                                     cTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACt                                                                             >  5:167182/1‑148 (MQ=255)                                                                      tGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCTGCAAGGCGTCGTAc                                                                                                                                 <  6:299645/96‑1 (MQ=255)                                                                      tGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTAc                                                                                                                                 >  5:299645/1‑96 (MQ=255)                                                                          aGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGcggcctcggtgtactgccaggaatcctgcttctgccgctcgtgataaatgcgcacacggttggcggccttttc                                                                        <  3:117200‑M2/149‑74 (MQ=255)                                                                          aGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAgtg                                                                       <  6:167182/149‑1 (MQ=255)                                                                          aGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAgtg                                                                       >  5:364833/1‑149 (MQ=255)                                                                           gTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAgtgg                                                                      <  7:295332/149‑1 (MQ=255)                                                                                ccGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGcggcctcggtgtactgccaggaatcctgcttctgccgctcgtgataaatgcgcacacggttggcggccttttccagggc                                                                  <  4:277389‑M2/149‑80 (MQ=255)                                                                                ccGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGAtg                                                                 >  7:67310/1‑149 (MQ=255)                                                                                  gAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGAtggt                                                               <  5:108124/149‑1 (MQ=255)                                                                                    ggCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGAtggtgg                                                             <  6:364833/149‑1 (MQ=255)                                                                                     gCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATggtggt                                                            <  8:67310/149‑1 (MQ=255)                                                                                        gACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTCGTGATGGTGGTGcc                                                         <  7:305395/149‑1 (MQ=255)                                                                                        gACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCGGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGGCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGcc                                                         <  4:296219/149‑1 (MQ=255)                                                                                              aCCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGAcccc                                                   >  5:312507/1‑149 (MQ=255)                                                                                                  tGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCgg                                               <  5:209674/149‑1 (MQ=255)                                                                                                   gCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGTCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCggg                                              >  2:68244/1‑149 (MQ=255)                                                                                                    ttCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGGCTGTATGTGCCGGGCGGCTAGGCGTCGTAGCCGTCGTGGGTGCTGATGAACGCCATCCCGGGC‑ATGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGGCGTCGCCGCggg                                              <  2:153885/147‑1 (MQ=255)                                                                                                        gCCAGAAGGTCACCCCTCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTTGTGCCGACCCCGCGGGGTGAg                                         <  3:86568/149‑1 (MQ=255)                                                                                                               ggTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGcggcctcggtgtactgccaggaatcctgcttctgccgctcgtgataaatgcgcacacggttggcggccttttccagggcctcgcgctggaccggggtaatacgggtcagc                                   >  4:117200‑M2/1‑39 (MQ=255)                                                                                                                gTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGa                                 <  8:87654/149‑1 (MQ=255)                                                                                                                   aCCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCt                              <  4:237884/149‑1 (MQ=255)                                                                                                                                      gCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGctgcct             <  6:337553/147‑1 (MQ=255)                                                                                                                                        cTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGctgc               <  2:41536/143‑1 (MQ=255)                                                                                                                                        cTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGctgc               >  1:41536/1‑143 (MQ=255)                                                                                                                                             tgtgCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGTCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCATCGCTg    <  1:68244/149‑1 (MQ=255)                                                                                                                                                gCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCCAAAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCATCGCTGgt  >  1:98376/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                CAGCGCGAGGCCCTGGAAAAGGCCGCCAACCGTGTGCGCATTTATCACGAGCGGCAGAAGCAGGATTCCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTCACCCCGCTGGACCGTGCTGGCCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGCTGATGAACGCCATCCCGGCC‑AAGGTTGCCGGCGTGACTGAAGTGGTGATGGTGGTGCCGACCCCGCGGGGTGAGGTCAACGAGCTGGTACTGGCGGCTGCCTGCATCGCTGGT  >  NC_002947/1105788‑1106078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.