New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1333453 | 45 (0.800) | 4 (0.070) | 4/250 | NT | 9.1% | intergenic (+1034/‑222) | PP_1157/PP_1159 | acetolactate synthase/membrane protein |
? | NC_002947 | = 1333518 | 36 (0.660) | intergenic (+1099/‑157) | PP_1157/PP_1159 | acetolactate synthase/membrane protein |
GCCTCAACAACTGGGTATGGACCCCGCCGCCTTTGTTCGATGATGCAGGGCGCTGCATGGCCTCGTACCTGACCATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1333303‑1333453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTACCGGCGATCAGCGAGCAGCCCAGGAAGCGCCCGCCCCGCTCGCTGCCGACACGGTTCGCGGCGGCGATATAAACGTTGTTGACATGCGCTGCCGTCATGGT < NC_002947/1333518‑1333374 GCCTCAACAACTGGGTATGGACCCCGCCGCCTTTGTTCGATGATGCAGGGCGCTGCATGGCCTCGTACCTGACCATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTC < 4:84188/149‑1 AGGGCGCTGCATGGCCTCGTACCTGACCATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTCCTCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTA > 5:237299/1‑149 GGCGCTGCATGGCCTCGTACCTGACCATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTCCTCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTACC > 2:218792/1‑149 CCATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTCCTCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTACCGGCGATCAGCGAGCAGCCCAGGAA < 6:237299/149‑1 ATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTCCTCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTACCGGCGATCAGCGAGCAGCCCAGGAAGC < 1:218792/149‑1 CTCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTACCGGCGATCAGCGAGCAGCCCAGGAAGCGCCCGCCCCGCTCGCTGCCGACACGGTTCGCGGCGGCGATATAAACGTTGTTGACATGCGCTGCCGTCATGGT > 4:284675/1‑147 GCCTCAACAACTGGGTATGGACCCCGCCGCCTTTGTTCGATGATGCAGGGCGCTGCATGGCCTCGTACCTGACCATGACGGCAGCGCATGTCAACAACGTTTATATCGCCGCCGCGAACCGTGTCGGCAGCGAGCGGGGCGGGCGCTTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1333303‑1333453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctCGGCTTCTGCACTGCCCACCTCGCCGATCGGCCAGCCATTGGTACCGGCGATCAGCGAGCAGCCCAGGAAGCGCCCGCCCCGCTCGCTGCCGACACGGTTCGCGGCGGCGATATAAACGTTGTTGACATGCGCTGCCGTCATGGT < NC_002947/1333518‑1333374 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |