| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1403673 = | 54 (0.960) | 4 (0.070) | 4/246 | NT | 7.3% | coding (2009/2067 nt) | PP_1228 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 1403710 = | 50 (0.930) | coding (1972/2067 nt) | PP_1228 | methyl‑accepting chemotaxis transducer | |||||
GAACTTGCAGATAGCCTCGGCGGCGGAAGAGCAGAGTGCGGTGGCCGAGGAAGTGAACCGTAACGTGGCCGGCATTCGAGACGTGACAGAATCACTGGCTGGGCAGGCCGATGAATCGGCACGCATCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1403804‑1403673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCCGCCGCCGAGGCTATCTGCAAGTTCATGTCGCTGATCACCGCCACGGCCTCGCCAATACGCTGCAGTGCCGGTAGTGC > NC_002947/1403710‑1403857 GAACTTGCAGATAGCCTCGGCGGCGGAAGAGCAGAGTGCGGTGGCCGAGGAAGTGAACCGTAACGTGGCCGGCATTCGAGACGTGACAGAATCACTGGCTGGGCAGGCCGATGAATCGGCACGCATC > 5:200100/1‑127GAACTTGCAGATAGCCTCGGCGGCGGAAGAGCAGAGTGCGGTGGCCGAGGAAGTGAACCGTAACGTGGCCGGCATTCGAGACGTGACAGAATCACTGGCTGGGCAGGCCGATGAATCGGCACGCATC < 6:200100/127‑1 TCACTGGCTGGGCAGGCCGATGAATCGGCACGCATCAGCCAGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCCGCCGCCGAGGCTATCTGCAAGTTCATGTCGCTGATCA > 2:215068/1‑149 ACTGGCTGGGCAGGCCGATGAATCGGCACGCATCAGCCAGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCC > 3:134974/1‑110 ACTGGCTGGGCAGGCCGATGAATCGGCACGCATCAGCCAGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCC < 4:134974/110‑1 CTGGCTGGGCAGGCCGATGAATCGGCACGCATCAGCCAGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCCGCCGCCGAGGCTATCTGCAAGTTCATGTCGCTGATCACCG > 3:180154/1‑149 AGCCAGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCTGAGGAGCTTCCGCCGCCGAGGCTATATGCAAGTTCATGTCGCTGATCACCGCCACGGCCTCGCCAATACGCTGCAGTGCCG > 1:292395/1‑149 AGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCCGCCGCCGAGGCTATCTGCAAGTTCATGTCGCTGATCACCGCCACGGCCTCGCCAATACGCTGCAGTGCCGGTAGTGC > 3:172593/1‑149 GAACTTGCAGATAGCCTCGGCGGCGGAAGAGCAGAGTGCGGTGGCCGAGGAAGTGAACCGTAACGTGGCCGGCATTCGAGACGTGACAGAATCACTGGCTGGGCAGGCCGATGAATCGGCACGCATCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1403804‑1403673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaGTGATTCTGTCACGTCTCGAATGCCGGCCACGTTACGGTTCACTTCCTCGGCCACCGCACTCT‑‑‑GCTCTTCCGCCGCCGAGGCTATCTGCAAGTTCATGTCGCTGATCACCGCCACGGCCTCGCCAATACGCTGCAGTGCCGGTAGTGC > NC_002947/1403710‑1403857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |