| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1745692 = | 59 (1.040) | 3 (0.060) | 3/244 | NT | 5.4% | coding (69/546 nt) | PP_1543 | hypothetical protein |
| ? | NC_002947 | 1745729 = | 50 (0.940) | coding (32/546 nt) | PP_1543 | hypothetical protein | |||||
GGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCATCCGGCCACGGAGGGCGGCGCATGCATGGAGTACCGCAATGCAAGTCGAGACCTCCACTGTCACCAAGCTGCTGATCACTGGCGCCGAAGGCCTGGACCCGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1745844‑1745692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAG > NC_002947/1745729‑1745876 GGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCATCCGGCCACGGAGGGCGGCGCATGCATGGAGTACCGCAATGCAAGTCGAGACCTCCACTGTCACCAAGCTGCTGATCACTGGCGCCGAAGGCCTGGACCCGAT > 2:206148/1‑149 CAAGCTGCTGATCACTGGCGCCGAAGGCCTGGACCCGATCAGCAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTT > 3:141115/1‑132 CAAGCTGCTGATCACTGGCGCCGAAGGCCTGGACCCGATCAGCAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTT < 4:141115/132‑1 TGCTGATCACTGGCGCCGAAGGCCTGGACCCGATCAGCAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCct > 3:158686/1‑147 AGCAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAG < 8:157276/148‑1 CAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAG > 8:202223/1‑149 CAGCTTGGTGACAGTGGAGGGATAGACTTGCATTGAGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAG < 6:203119/149‑1 GGCAAATGGCCACAATGCTGTGATTTTAAACAGCCACCATGCCGCATCCGGCCACGGAGGGCGGCGCATGCATGGAGTACCGCAATGCAAGTCGAGACCTCCACTGTCACCAAGCTGCTGATCACTGGCGCCGAAGGCCTGGACCCGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1745844‑1745692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcAGCTTGGTGACAGTGGAGGTCTCGACTTGCATTGCGGTACTCCATGCATGCGCCGCCCTCCGTGGCCGGATGCGGCATGGTGGCTGTTTAAAATCACAGCATTGTGGCCATTTGCCTGCCGTGATTTAGTTGGGGCTCAATACAGAAG > NC_002947/1745729‑1745876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |