New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1825594	57 (1.010)	4 (0.070)	4/250	NT	6.9%	coding (181/1092 nt)	PP_1627	hypothetical protein
	?	NC_002947	= 1825621	53 (0.970)					coding (208/1092 nt)	PP_1627	hypothetical protein

GTGTCCAGCCCTGTCCCTTATGTAACGCAACAGCTGATCTACCTCCTTTATGGCGAGCGCCGGATCTATCAGCTGGAGGCAAAACTCAGCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1825444‑1825594 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgGCCAGCCGGCAAAAGCCTGTGGCTGGTCGGTAA  <  NC_002947/1825621‑1825589                                                                                                                                                                                          GTGTCCAGCCCTGTCCCTTATGTAACGCAACAGCTGATCTACCTCCTTTATGGCGAGCGCCGGATCTATCAGCTGGAGGCAAAACTCAGCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTAC                                     >  6:154913/1‑149                                                              GGATCTATCAGCTGGAGGCAAAACTCAGCATCCTCACCGCCCTGGGCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTAC                                     >  1:252409/1‑88                                                              GGATCTATCAGCTGGAGGCAAAACTCAGCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTAC                                     <  2:252409/88‑1                                                                                     CTCAGCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTACCGGCCAGCCGGCAAAAGCCTGTGGCTGGTCG      >  3:333701/1‑96                                                                                     CTCAGCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTACCGGCCAGCCGGCAAAAGCCTGTGGCTGGTCG      <  4:333701/96‑1                                                                                         GCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTACCGGCCAGCCGGCAAAAGCCTGTGGCTGGTCGGTAA  >  7:201473/1‑96                                                                                         GCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTACCGGCCAGCCGGCAAAAGCCTGTGGCTGGTCGGTAA  <  8:201473/96‑1                                                                                                                                                                                          GTGTCCAGCCCTGTCCCTTATGTAACGCAACAGCTGATCTACCTCCTTTATGGCGAGCGCCGGATCTATCAGCTGGAGGCAAAACTCAGCATCCTCACCGCCCTGGCCCGTTGCAAGGCGGCTGAGCTGCCGGTGATCCGCGTGCTTACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1825444‑1825594 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgGCCAGCCGGCAAAAGCCTGTGGCTGGTCGGTAA  <  NC_002947/1825621‑1825589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.