New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 191031234 (0.600)3 (0.060) 3/244 NT 8.0% coding (500/1341 nt) PP_1710 phthalate permease family MFS transporter
?NC_002947 = 1910353 37 (0.690)coding (459/1341 nt) PP_1710 phthalate permease family MFS transporter

TTCCTTGCTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1910161‑1910312
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcggCATGGCCAGCAGCATCTACGTATGTGGCCAGTACCTGGGCACCGCGCTGTTCACCGGTGCGCTGCTGTGGCTGGCGACCACCTATGACTGGCGCCACGTGTTCTACAGCACCGGTCTGGTCGGCATCCTGTTCGGCGTCGTG  <  NC_002947/1910353‑1910212
                                                                                                                                                                                                                                                                                                      
TTCCTTGCTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGag                                                                                                                                                   >  1:308291/1‑147
  CCTTGCTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGACCAGGATGCCGCCCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCG                                                                                                                                                 >  7:315001/1‑149
   CTTGCTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCG                                                                                                                                                 <  4:177693/148‑1
                             GGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCG                                                                                                                                                   >  1:25871/1‑120
                             GGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCG                                                                                                                                                   <  2:25871/120‑1
                                              AGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGCATGGCCAGCAGCATCTACGTATGTGGCCAGTACCTGGGCACC                                                                                                     >  5:171002/1‑149
                                                  ACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGCATGGCCAGCAGCATCTACGTATGTGGCCAGTACCTGGGCACCGCGC                                                                                                 <  6:171002/149‑1
                                                      GACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACATCGCGGCATGGCCAGCAGCATCTACGTATGTGGCCAGTACCTGGGCACCGCGCTGTT                                                                                             <  5:288726/149‑1
                                                                                                                                                 AGCGCGGCATGGCCAGCAGCATCTACGTATGTGGCCAGTACCTGGGCACCGCGCTGTTCACCGGTGCGCTGCTGTGGCTGGCGACCACCTATGACTGGCGCCACGTGTTCTACAGCACCGGTCTGGTCGGCATCCTGTTCGGCGTCGTG  <  1:339582/149‑1
                                                                                                                                                                                                                                                                                                      
TTCCTTGCTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1910161‑1910312
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcggCATGGCCAGCAGCATCTACGTATGTGGCCAGTACCTGGGCACCGCGCTGTTCACCGGTGCGCTGCTGTGGCTGGCGACCACCTATGACTGGCGCCACGTGTTCTACAGCACCGGTCTGGTCGGCATCCTGTTCGGCGTCGTG  <  NC_002947/1910353‑1910212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.