New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1910312	34 (0.600)	3 (0.060)	3/244	NT	8.0%	coding (500/1341 nt)	PP_1710	phthalate permease family MFS transporter
	?	NC_002947	= 1910353	37 (0.690)					coding (459/1341 nt)	PP_1710	phthalate permease family MFS transporter

CTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAGGCGA  >  NC_002947/1910168‑1910459                                                                                                                                                 |                                                                                                                                                    cTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGcc                                                                                                                                                 <  4:171086/149‑1 (MQ=255)    acattcttGCAGTTCAGCGGGTCGCGGTACAGCACCAGACACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAg                                                                                                                                              >  7:153465/4‑149 (MQ=255)    aCCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCa                                                                                                                                               <  1:181522/148‑1 (MQ=255)      cttcttGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGGCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAgg                                                                                                                                             >  5:35120/1‑148 (MQ=255)            gCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGc                                                                                                                                      >  3:290624/1‑149 (MQ=255)                  cAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACAt                                                                                                                                 <  8:193576/148‑1 (MQ=255)                     cGGGTCGCGGTACAGCACCAGCCACACGACGCCGAAGAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGt                                                                                                                             <  3:186384/149‑1 (MQ=255)                      gggTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTa                                                                                                                            <  5:162422/149‑1 (MQ=255)                      gggTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTa                                                                                                                            <  2:233016/149‑1 (MQ=255)                       ggTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACg                                                                                                                              >  5:29107/1‑146 (MQ=255)                       ggTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAg                                                                                                                           <  6:29107/149‑1 (MQ=255)                                    cACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCa                                                                                                              <  6:290106/149‑1 (MQ=255)                                    cACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCa                                                                                                              <  1:341490/149‑1 (MQ=255)                                       cAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGc                                                                                                                                      >  5:221489/1‑122 (MQ=255)                                       cAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGc                                                                                                                                      <  6:221489/122‑1 (MQ=255)                                        aGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGcatggccagcagcatctacgtatgtggccagtacctgggcacc                                                                                                          >  5:171002‑M1/1‑106 (MQ=255)                                            acacGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGcatggccagcagcatctacgtatgtggccagtacctgggcaccgcgc                                                                                                      <  6:171002‑M1/149‑48 (MQ=255)                                             cacGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGccgcgct                                                                                                     <  1:339582‑M2/149‑8 (MQ=255)                                                gacgCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGGCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTcgc                                                                                                  <  6:35120/149‑1 (MQ=255)                                                gacgCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACATCGCGGcatggccagcagcatctacgtatgtggccagtacctgggcaccgcgctgtt                                                                                                  <  5:288726‑M1/149‑52 (MQ=255)                                                gacgCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTcgc                                                                                                  <  2:339582/149‑1 (MQ=255)                                                            gATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACAGACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAAc                                                                                       >  6:157570/1‑148 (MQ=255)                                                                 cGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATAcc                                                                                 <  1:141233/149‑1 (MQ=255)                                                                    ccAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGCGCGGGGCACCATACCGt                                                                               >  3:36241/1‑148 (MQ=255)                                                                       gACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAAcc                                                                           >  1:206475/1‑149 (MQ=255)                                                                       gACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAAcc                                                                           >  8:81777/1‑149 (MQ=255)                                                                          cGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCa                                                                        >  2:307872/1‑149 (MQ=255)                                                                                 gTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGt                                                                 >  1:223205/1‑149 (MQ=255)                                                                                  tAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACgg                                                                     >  8:150406/1‑144 (MQ=255)                                                                                  tAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACgg                                                                     <  7:150406/144‑1 (MQ=255)                                                                                         cGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCggg                                                         <  3:311247/149‑1 (MQ=255)                                                                                               gcCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGcc                                                   >  3:54917/1‑149 (MQ=255)                                                                                                        aGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTc                                           >  3:334338/1‑148 (MQ=255)                                                                                                          gtggtCTCCAGCCACAGCAGCGCACCGGTGAAGAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCAt                                        <  4:298048/149‑1 (MQ=255)                                                                                                            ggtCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATgg                                      <  2:223205/149‑1 (MQ=255)                                                                                                                               gcACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAg                   <  7:81777/149‑1 (MQ=255)                                                                                                                                   cGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAGGcc                >  2:64151/1‑148 (MQ=255)                                                                                                                                     gTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAGGCCGaa             <  4:290624/149‑1 (MQ=255)                                                                                                                                        aaCAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGccgcgatgttcaccggtgcgctgctgtggctggcgaccacctatgactggcgccacgtgttctacagcaccggtctggtcggcatcctgttcggcgtc          <  5:288726‑M2/149‑99 (MQ=255)                                                                                                                                        aaCAGCGCGGGGCACTGTTACTGGCCACTTACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACAATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAGGCCGAACa           <  8:153465/148‑1 (MQ=255)                                                                                                                                           aGCGCGGcatggccagcagcatctacgtatgtggccagtacctgggcaccgcgctgttcaccggtgcgctgctgtggctggcgaccacctatgactggcgccacgtgttctacagcaccggtctggtcggcatcctgttcggcgtcgtg       <  1:339582‑M1/149‑143 (MQ=255)                                                                                                                                            gcgcGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGccgcgctgttcaccggtgcgctgctgtggctggcgaccacctatgactggcgccacgtgttctacagcaccggtctggtcggcatcctgttcggcgtcgtgt      <  6:171002‑M2/149‑103 (MQ=255)                                                                                                                                             cgcgGTTCCCAGGTACTGTCCACTTACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAgg     <  4:54917/149‑1 (MQ=255)                                                                                                                                                ggTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGccgcgctgttcaccggtgcgctgctgtggctggcgaccacctatgactggcgccacgtgttctacagcaccggtctggtcggcatcctgttcggcgtcgtgtggct  >  5:171002‑M2/1‑43 (MQ=255)                                                                                                                                                 |                                                                                                                                                    CTTACCTTCTTGCAGTTCAGCGGGTCGCGGTACAGCACCAGCCACACGACGCCGAACAGGATGCCGACCAGACCGGTGCTGTAGAACACGTGGCGCCAGTCATAGGTGGTCGCCAGCCACAGCAGCGCACCGGTGAACAGCGCGGTGCCCAGGTACTGGCCACATACGTAGATGCTGCTGGCCATGCCGCGCTCGCGAGCGGGGAACCATACCGTAACCGCACGGCTGTTGGCCGGGAAGGCCGGGGCCTCCATGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAGGCGA  >  NC_002947/1910168‑1910459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.