New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1921330 | 53 (0.940) | 7 (0.130) | 4/244 | NT | 11.9% | coding (768/963 nt) | PP_1720 | alcohol dehydrogenase |
? | NC_002947 | = 1921356 | 54 (1.010) | coding (794/963 nt) | PP_1720 | alcohol dehydrogenase |
GTGGGCGCCAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1921178‑1921330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaacAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGGTGGAACCGGTAATTTCCAGACGCTTGCCCAGCACTTGGGCCAGGTCCAGCTCGAACTTGCGTCCGCCCATCAGGCCGATGATCACCCAGCGCCCGTCACGGGCC < NC_002947/1921356‑1921216 GTGGGCGCCAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGGTGGGGGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCCTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGC < 1:274498/149‑1 GCGCCAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTG > 3:267543/1‑143 GCGCCAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTG < 4:267543/143‑1 TGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCG > 5:328384/1‑149 TGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTG > 8:60776/1‑149 CCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGG < 4:245255/149‑1 CCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGG < 6:328384/149‑1 CCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGG < 7:60776/149‑1 CCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGG < 5:91427/149‑1 CCGTGACGGGCGCTGGGTGATCATCGACCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGG < 5:241384/149‑1 actGCAGCAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGGTGGAACCGGTAATTTCCAGACGCTTGCCCAGCACTTGGGCCAGGTCCAGCTCGAACTTGCGTCCGCCCATCAGGCCGATGATCACCCAGCGCCCGTCACGGGCC < 4:220981/146‑1 GCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGGTGGAACCGGTAATTTCCAGACGCTTGCCCAGCACTTGGGCCAGGTCCAGCTCGAACTTGCGTCCGCCCATCAGGCCGATGATCACCCAGCGCCCGTCACGGGC > 1:329381/1‑147 GCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGGTGGAACCGG > 1:120149/1‑53 GCGCAACAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGGTGGAACCGG < 2:120149/53‑1 GTGGGCGCCAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAG‑CTGGACCTGGCCCAAGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1921178‑1921330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaacAGCTCGGCCTTGAAGCCGTCATCACGGTTGCGCAGGGTGGAACCGGTAATTTCCAGACGCTTGCCCAGCACTTGGGCCAGGTCCAGCTCGAACTTGCGTCCGCCCATCAGGCCGATGATCACCCAGCGCCCGTCACGGGCC < NC_002947/1921356‑1921216 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |