New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 192133053 (0.940)7 (0.130) 4/244 NT 11.9% coding (768/963 nt) PP_1720 alcohol dehydrogenase
?NC_002947 = 1921356 54 (1.010)coding (794/963 nt) PP_1720 alcohol dehydrogenase

CAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACC  >  NC_002947/1921186‑1921478
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cAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGt                                                                                                                                                      >  3:12615/1‑148 (MQ=255)
        gTGAGCTGAACCTCAAGGTGCTGGCCCGTGACGGGCGCTGGGTGATCTTCGGCCTGATGGGCGGAGGGAAGTTCGAGGTGGACCTGGCCCT‑‑AGTGGTGGGCAGGCGTGTGGATATTTCCGGTTCCACCGTTCGGAACCGGGATGGCgtc                                                                                                                                             >  4:286348/1‑147 (MQ=255)
         tGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACTGCt                                                                                                                                            >  1:170183/1‑149 (MQ=255)
             cTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTc                                                                                                                                          >  2:329381/1‑147 (MQ=255)
              tGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccg                                                                                                                                       >  5:328384‑M1/1‑131 (MQ=255)
                   cTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTTATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGa                                                                                                                                  <  7:225568/149‑1 (MQ=255)
                   cTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGcc                                                                                                                                    >  2:44380/1‑147 (MQ=255)
                          tgctgGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccgtcatcacggttg                                                                                                                           >  8:60776‑M1/1‑119 (MQ=255)
                            cttgCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGATCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTgcg                                                                                                                         <  3:286348/146‑1 (MQ=255)
                              ggCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgctgcagt                                                                                                                       <  4:220981‑M2/149‑9 (MQ=255)
                               gCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgc                                                                                                                        >  1:329381‑M2/1‑140 (MQ=255)
                                cccGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccgtcatcacggttgcgcagg                                                                                                                     <  4:245255‑M1/149‑37 (MQ=255)
                                cccGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccgtcatcacggttgcgcagg                                                                                                                     <  6:328384‑M1/149‑37 (MQ=255)
                                cccGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccgtcatcacggttgcgcagg                                                                                                                     <  7:60776‑M1/149‑37 (MQ=255)
                                 ccGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCAGCGGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGGTTCAAGGCCGAGCTGTTGcgcg                                                                                                                       >  1:287527/1‑148 (MQ=255)
                                 ccGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccgtcatcacggttgcgcaggg                                                                                                                    <  5:91427‑M1/149‑38 (MQ=255)
                                 ccGTGACGGGCGCTGGGTGATCATCGACCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACagctcggccttgaagccgtcatcacggttgcgcaggg                                                                                                                    <  5:241384‑M1/149‑38 (MQ=255)
                                           cgcTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTgcagcagc                                                                                                           >  2:226392/1‑148 (MQ=255)
                                            gcTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCaa                                                                                                         <  1:17263/149‑1 (MQ=255)
                                               gggTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAATCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTa                                                                                                      <  1:269569/149‑1 (MQ=255)
                                               gggTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTa                                                                                                      >  7:11477/1‑149 (MQ=255)
                                                ggTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTAt                                                                                                     <  1:41061/149‑1 (MQ=255)
                                                    atcatcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGc                                                                                                  <  6:370154/148‑1 (MQ=255)
                                                     tcatcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTAt                                                                                                     >  3:173296/1‑144 (MQ=255)
                                                     tcatcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTAt                                                                                                     <  4:173296/144‑1 (MQ=255)
                                                      catcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGaa                                                                                                                     >  2:214480/1‑127 (MQ=255)
                                                      catcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGaa                                                                                                                     <  1:214480/127‑1 (MQ=255)
                                                       atcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGAGAACTGCAGCAGCAAGTATGGCCGCt                                                                                              >  8:239743/1‑149 (MQ=255)
                                                        tcGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTg                                                                                             >  1:152960/1‑149 (MQ=255)
                                                           gCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGGTACACCCTGCGCCACCGTGATGACGGCTTCAAGGCCGAGCAGTTCCGCGAACTGCAGCAGCAACTAGCGCCCCTGTTc                                                                                          >  7:248605/1‑149 (MQ=255)
                                                               gATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGcc                                                                                       >  2:16602/1‑148 (MQ=255)
                                                                aTGGGCTGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTCGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGTCCGAGCTGTTGCGCGAACTGCAGCATCAAGTATGGCCGCTGTTCGcc                                                                                       <  2:295822/147‑1 (MQ=255)
                                                                   ggCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAggg                                                                                  <  1:44380/149‑1 (MQ=255)
                                                                    gCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAgggg                                                                                 <  8:11477/149‑1 (MQ=255)
                                                                          gCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAg                                                                                    >  6:159782/1‑140 (MQ=255)
                                                                          gCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAg                                                                                    <  5:159782/140‑1 (MQ=255)
                                                                          gCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCg                                                                               >  5:66772/1‑145 (MQ=255)
                                                                          gCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCg                                                                               <  6:66772/145‑1 (MQ=255)
                                                                          ccAAGTTCGAGCTGGACCAGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTAACGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTATTGCGCGCACTGCAGAAGCAAGTATGGCCTCTGTTCGCCGAGGGGAGGtag                                                                           >  8:71389/2‑147 (MQ=255)
                                                                                  gAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAAc                                                                                                                    <  7:182531/100‑1 (MQ=255)
                                                                                  gAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAAc                                                                                                                    >  8:182531/1‑100 (MQ=255)
                                                                                              gCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGacac                                                    <  2:287527/149‑1 (MQ=255)
                                                                                              gCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGa                                                       >  4:31619/1‑146 (MQ=255)
                                                                                              gCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGa                                                       <  3:31619/146‑1 (MQ=255)
                                                                                              gCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTGCCACGGTGCGCAACCGTGATGACGGCTTCAAGGCGGAGCTGTTGCGCGAACTGCAGCAGGAAGTATGGCCGGTGTTCGCGGAGGGGCGGTTGGCGCCGCAGCTGGT‑‑CGacac                                                    <  8:248605/149‑1 (MQ=255)
                                                                                               cccA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACAcc                                                   >  5:169397/1‑149 (MQ=255)
                                                                                                         cTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCgg                                            <  8:39102/148‑1 (MQ=255)
                                                                                                              cAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGt                                      >  6:85724/1‑149 (MQ=255)
                                                                                                                      tGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTg                                   <  6:288495/144‑1 (MQ=255)
                                                                                                                      tGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTg                                   >  5:288495/1‑144 (MQ=255)
                                                                                                                       ggAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAgg                             >  7:138590/1‑149 (MQ=255)
                                                                                                                        gAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGacac                                                    <  2:119048/125‑1 (MQ=255)
                                                                                                                        gAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTg                                          >  8:113951/1‑135 (MQ=255)
                                                                                                                        gAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTg                                          <  7:113951/135‑1 (MQ=255)
                                                                                                                        gAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAggc                            >  3:267438/1‑149 (MQ=255)
                                                                                                                        gAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAggc                            >  2:102760/1‑149 (MQ=255)
                                                                                                                               ccGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgc                                                                                                                        <  2:120149‑M2/53‑8 (MQ=255)
                                                                                                                               ccGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgc                                                                                                                        >  1:120149‑M2/1‑46 (MQ=255)
                                                                                                                                       aCCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCt             <  6:169397/149‑1 (MQ=255)
                                                                                                                                       aCCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCt             <  5:245989/149‑1 (MQ=255)
                                                                                                                                       aCCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCt             >  4:302282/1‑149 (MQ=255)
                                                                                                                                        cccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggtcgatgatcacccagcgcccgtcacgg               <  5:241384‑M2/149‑113 (MQ=255)
                                                                                                                                        cccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacgg               <  5:91427‑M2/149‑113 (MQ=255)
                                                                                                                                        cccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTg            <  2:152960/149‑1 (MQ=255)
                                                                                                                                         ccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacggg              <  6:328384‑M2/149‑114 (MQ=255)
                                                                                                                                         ccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacggg              <  7:60776‑M2/149‑114 (MQ=255)
                                                                                                                                         ccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacggg              <  4:245255‑M2/149‑114 (MQ=255)
                                                                                                                                         ccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTgg           <  2:349215/149‑1 (MQ=255)
                                                                                                                                         ccTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTg            >  5:24030/1‑148 (MQ=255)
                                                                                                                                          gggtggaaCCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGga          <  3:89037/143‑1 (MQ=255)
                                                                                                                                          cTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGga          <  1:226392/149‑1 (MQ=255)
                                                                                                                                           actgcagcagctcggccttgaagccgtcatcacggttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacgggcc            <  4:220981‑M1/146‑142 (MQ=255)
                                                                                                                                            gcgcAACagctcggccttgaagccgtcatcacggttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacgggc             >  1:329381‑M1/1‑7 (MQ=255)
                                                                                                                                            gcgcAACagctcggccttgaagccgtcatcacggttgcgcagggtggaaccgg                                                                                                           <  2:120149‑M1/53‑47 (MQ=255)
                                                                                                                                            gcgcAACagctcggccttgaagccgtcatcacggttgcgcagggtggaaccgg                                                                                                           >  1:120149‑M1/1‑7 (MQ=255)
                                                                                                                                              gcAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGGGGTTGTCGCCGCAGCAGGGTGGCGACACCTATCCGGTGTATTTTCCCCAGGCGGCGTATGCCGACCTGga          >  1:116067/1‑148 (MQ=255)
                                                                                                                                               cAACCGTGATGACGGCTTCAAGGCCGAGCTgttgcgcagggtggaaccggtaatttccagacgcttgcccagcacttgggccaggtccagctcgaacttgcgtccgcccatcaggccgatgatcacccagcgcccgtcacgggccagca        >  8:60776‑M2/1‑30 (MQ=255)
                                                                                                                                                aaCCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGaccaa    >  2:157101/1‑149 (MQ=255)
                                                                                                                                                aaCCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGaccaa    >  2:218979/1‑149 (MQ=255)
                                                                                                                                                  ccGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGaccaacc  <  6:24030/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                       
CAGCTACGGTGAGCTGAACCTCAAGCTGCTGGCCCGTGACGGGCGCTGGGTGATCATCGGCCTGATGGGCGGACGCAAGTTCGAGCTGGACCTGGCCCA‑‑AGTGCTGGGCAAGCGTCTGGAAATTACCGGTTCCACCCTGCGCAACCGTGATGACGGCTTCAAGGCCGAGCTGTTGCGCGAACTGCAGCAGCAAGTATGGCCGCTGTTCGCCGAGGGGCGGTTGTCGCCGCAGCTGGT‑‑CGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACC  >  NC_002947/1921186‑1921478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.