| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2155709 = | 42 (0.740) | 3 (0.060) | 3/242 | NT | 6.4% | coding (151/1011 nt) | plsX | phosphate acyltransferase |
| ? | NC_002947 | 2155807 = | 48 (0.910) | coding (249/1011 nt) | plsX | phosphate acyltransferase | |||||
GCCTGGGCTTTTCCGTCGCGCACCAGTTCGAGGGCGATGCGCATCGACGAATCCGGCTTGCCGCGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2155860‑2155709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaagccGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGTCAGTGCCGGCAATACCGGGGCGCTGATGGCGTTGTCGCGCTTCGTGCTCAAGACCTTGCCGGGTATCGACCGGCCGGCCATGGTGGCG > NC_002947/2155807‑2155954 GCCTGGGCTTTTCCGTCGCGCACCAGTTCGAGGGCGATGCGCATCGACGAATCCGGCTTGCCGCGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGC > 1:153195/1‑147GCCTGGGCTTTTCCGTCGCGCACCAGTTCGAGGGCGATGCGCATCGACGAATCCGGCTTGCCGCGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGC > 3:86719/1‑147 CTGGGCTTTTCCGTCGCGCACCAGTTCGAGGGCGATGCGCATCGACGAATCCGGCTTGCCGCGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGCAAGC < 2:139908/149‑1 ATCCGGCTTGCCGCGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGCAAGCCGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAG > 2:2434/1‑149 CGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGCAAGCCGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGT > 8:164554/1‑149 GCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGCAAGCCGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGTC < 7:164554/149‑1 CAAGCCGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGTCAGTGCCGGCAATACCGGGGCGCTGATGGCGTTGTCGCGCTTCGTGCTCAAGACCTTGCCGGGTATCGACCGGCCGGCCAT < 3:86993/147‑1 AGCCGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGTCAGTGCCGGCAATACCGGGGCGCTGATGGCGTTGTCGCGCTTCGTGCTCAAGACCTTGCCGGGTATCGACCGGCCGGCCATGGTG > 4:323280/1‑149 CGGATTCGTCGTTGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGTCAGTGCCGGCAATACCGGGGCGCTGATGGCGTTGTCGCGCTTCGTGCTCAAGACCTTGCCGGGTATCGACCGGCCGGCCATGGTGGCG < 7:2501/149‑1 GCCTGGGCTTTTCCGTCGCGCACCAGTTCGAGGGCGATGCGCATCGACGAATCCGGCTTGCCGCGCAACGCCTGGGATGGCCGCTCGTCCATGCCGACTACCTCACTGGCGGCCACAACCTGCAGGCGCGCGCGATCCGCAGCTGGCAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2155860‑2155709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaagccGGATTCGTCGATGCGCATCGCCCTCGAACTGGTGCGCGACGGAAAAGCCCAGGCCTGTGTCAGTGCCGGCAATACCGGGGCGCTGATGGCGTTGTCGCGCTTCGTGCTCAAGACCTTGCCGGGTATCGACCGGCCGGCCATGGTGGCG > NC_002947/2155807‑2155954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |