New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2157010 = | 42 (0.740) | 4 (0.080) | 4/242 | NT | 9.6% | coding (314/939 nt) | fabD | malonyl‑CoA‑ACP transacylase |
? | NC_002947 | 2157064 = | 36 (0.680) | coding (368/939 nt) | fabD | malonyl‑CoA‑ACP transacylase |
CTGCATCAGCTGACCGCGGCGCTCGACCAGGCGAACGGCATCTTTCAGGCTGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2157065‑2157010 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgatgcAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTCAGCGCCGTGAACTTCAACTCGCCTGGTCAGGTGGTCATCGCCGG > NC_002947/2157064‑2157211 CTGCATCAGCTGACCGCGGCGCTCGACCAGGCGAACGGCATCTTTCAGGCTGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTG > 2:65462/1‑146 TGCATCAGCTGACCGCGGTGCTCGACCAGGCGAACGGCATCTTTCAGGCTGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGC < 5:183549/134‑1 TGCATCAGCTGACCGCGGTGCTCGACCAGGCGAACGGCATCTTTCAGGCTGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGC > 6:183549/1‑134 GCATCAGCTGACCGCGGCGCTCGACCAGGCGAACGGCATCTTTCAGGCTGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGAT > 8:229882/1‑149 CTGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTCAGCGCCGTGAACTTCAACTCGCCTGGTCAGGTGGTCAT > 1:78413/1‑149 TGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTC < 5:63984/110‑1 TGATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCAGCTGAAGATGAAGTGGTC > 6:63984/1‑110 GATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTCAGCGCCGTGAACTTCAACTCGCCTGGTCAGGTGGTCATCG > 4:162648/1‑149 ATGCAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTCAGCGCCGTGAACTTCAACTCGCCTGGTCAGGTGGTCATCGC > 3:260723/1‑149 CAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTCAGCGCCGTGAACTTCAACTCGCCTGGTCAGGTGGTCATCGCCGG < 8:256347/149‑1 CTGCATCAGCTGACCGCGGCGCTCGACCAGGCGAACGGCATCTTTCAGGCTGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2157065‑2157010 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgatgcAGGAAGCCGTACCGGCCGGTCACGGCGCCATGGCTGCCATTCTCGGCCTGGACGATGCTGTGGTCGTGGAACTCTGCGCCGAAGCCGCTGAAGATGAAGTGGTCAGCGCCGTGAACTTCAACTCGCCTGGTCAGGTGGTCATCGCCGG > NC_002947/2157064‑2157211 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |