New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2394741 =	84 (1.490)	6 (0.110)	5/244	NT	7.7%	coding (652/1413 nt)	dacB	D‑alanyl‑D‑alanine carboxypeptidase
	?	NC_002947	2394771 =	65 (1.220)					coding (622/1413 nt)	dacB	D‑alanyl‑D‑alanine carboxypeptidase

GGTCAACCTCAAGGCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGGTGATGT‑GCGCTACAAC‑CCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2394895‑2394741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTGACCA  >  NC_002947/2394771‑2394917                                                                                                                                                                                                                                                                                                                  GGTCAACCTCAAGGCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCGGGTAGCCTCTAAGAACTGCACCGGTGATGT‑GCGCTACAAC‑C                                                                                                                                                           >  8:206143/1‑149     AACCTCAAGGCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGGTGATGT‑GCGCTACAAC‑CCGGT                                                                                                                                                       >  1:267733/1‑149     AACATCAAGGCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGCCAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCAACGGTGATGT‑GCGCTACACC‑CCGGT                                                                                                                                                       >  3:234169/1‑149      ACCTCAAGGCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGGTGATGT‑GCGCTACAAC‑CCGGTG                                                                                                                                                      >  6:248561/1‑149              GCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGG‑GTTGTAGCGC‑ACATCACCGGTGCATTTCTT                                                                                                                                              <  8:135701/149‑1                CCTGCGCGTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGG‑GTTGTAGCGC‑ACATCACCGGTGCATTTCTTAG                                                                                                                                            <  6:43612/149‑1                    CGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGG‑GTTGTAGCGC‑ACATCACCGGTGCATTTCTTAGAG                                                                                                                                          <  5:321059/147‑1                                         GGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGG‑GTTGTAGCGC‑ACATCACCGGTGCATTTCTTAG                                                                                                                                            <  3:269979/124‑1                                         GGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCAAAGAAATGCACCGG‑GTTGTAGCGC‑ACATCACCGGTGCATTTCTTAG                                                                                                                                            >  4:269979/1‑124                                                                                                                                 CCGGTGATGT‑GCGCTACAAC‑CCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTG                           <  6:321059/149‑1                                                                                                                                                       CCGGTGCATTTCTTAGAGGCTTCCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACTGTTAGTTTGCGACCATTATTGCGCGCGACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCttgttt       <  5:252796/149‑7                                                                                                                                                        CGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTG      <  5:69660/149‑1                                                                                                                                                          GTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATT                                                          >  7:46430/1‑95                                                                                                                                                          GTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATT                                                          <  8:46430/95‑1                                                                                                                                                             CATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTGACCA  <  7:220240/148‑1                                                                                                                                                                                                                                                                                                                  GGTCAACCTCAAGGCCCTGCGCTTCGTGGCGCGCAATGATGGTGGCAAGGTCACCGTCGCCGTCGAGCCACCGATTGCCCGCATCCGCATCGACAACCAGGTCAAGCCGGTAGCCTCTAAGAAATGCACCGGTGATGT‑GCGCTACAAC‑CCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2394895‑2394741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTGACCA  >  NC_002947/2394771‑2394917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.