New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2394741 =84 (1.490)6 (0.110) 5/244 NT 7.7% coding (652/1413 nt) dacB D‑alanyl‑D‑alanine carboxypeptidase
?NC_002947 2394771 = 65 (1.220)coding (622/1413 nt) dacB D‑alanyl‑D‑alanine carboxypeptidase

TTGCGCGCACGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTGACCA  >  NC_002947/2394624‑2394917
                                                                                                                                                     |                                                                                                                                                  
ttGCGCGCACGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCAt                                                                                                                                                   <  7:183038/149‑1 (MQ=255)
 tGCGCGCACGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCAtt                                                                                                                                                  >  7:184028/1‑149 (MQ=255)
  gcgcgcACGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCAttt                                                                                                                                                 >  3:140511/1‑149 (MQ=255)
      gcACGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTa                                                                                                                                             <  1:159008/149‑1 (MQ=255)
       gccctgcgcttcgtggcgcgcaatgatggtggcaaggtcaccgtcgccgtcgagccaccgattgcccgcatccgcatcgacaaccaggtcaagccggtagcctctaagaaatgcaccgggttgtagcgcacatcaccggtgcATTTCtt                                                                                                                                              <  8:135701‑M2/7‑1 (MQ=255)
        aCGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTaga                                                                                                                                           <  1:108937/149‑1 (MQ=255)
        aCGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTaga                                                                                                                                           <  3:140913/149‑1 (MQ=255)
        aCGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTaga                                                                                                                                           <  4:140167/149‑1 (MQ=255)
        aCGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTaga                                                                                                                                           <  4:145460/149‑1 (MQ=255)
        aCGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTa                                                                                                                                             >  2:155570/1‑147 (MQ=255)
        aCGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTa                                                                                                                                             >  3:161024/1‑147 (MQ=255)
         cctgcgcgtcgtggcgcgcaatgatggtggcaaggtcaccgtcgccgtcgagccaccgattgcccgcatccgcatcgacaaccaggtcaagccggtagcctctaagaaatgcaccgggttgtagcgcacatcaccggtgcATTTCTTag                                                                                                                                            <  6:43612‑M2/9‑1 (MQ=255)
          ggCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGCCCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAgg                                                                                                                                         >  8:89353/1‑149 (MQ=255)
             cgcttcgtggcgcgcaatgatggtggcaaggtcaccgtcgccgtcgagccaccgattgcccgcatccgcatcgacaaccaggtcaagccggtagcctctaagaaatgcaccgggttgtagcgcacatcaccggtgcATTTCTTagag                                                                                                                                          <  5:321059‑M2/11‑1 (MQ=255)
              ccGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTAc                                                                                                                                     <  4:164447/149‑1 (MQ=255)
                 gcggcgTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCgg                                                                                                                                  <  4:190269/149‑1 (MQ=255)
                    gcgTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCtt                                                                                                                               <  6:328578/149‑1 (MQ=255)
                           tGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTgg                                                                                                                        <  8:178093/149‑1 (MQ=255)
                           tGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTgg                                                                                                                        >  1:112911/1‑149 (MQ=255)
                           tGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTgg                                                                                                                        >  1:162294/1‑149 (MQ=255)
                                  ggtggcaaggtcaccgtcgccgtcgagccaccgattgcccgcatccgcatcgacaaccaggtcaagccggtagcctctaagaaatgcaccgggttgtagcgcacatcaccggtgcATTTCTTag                                                                                                                                            <  3:269979‑M2/9‑1 (MQ=255)
                                  ggtggcaaggtcaccgtcgccgtcgagccaccgattgcccgcatccgcatcgacaaccaggtcaagccggtagcctcaaagaaatgcaccgggttgtagcgcacatcaccggtgcATTTCTTag                                                                                                                                            >  4:269979‑M2/116‑124 (MQ=255)
                                   tCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCgat                                                                                                                >  3:58263/1‑149 (MQ=255)
                                     gAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCgatg                                                                                                               <  4:174875/148‑1 (MQ=255)
                                     gAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACAACACCGGGGGATTGGTTAGGGGGAACCGGGTTGCCCTGGTTgggggggc                                                                                                              >  8:55532/1‑142 (MQ=255)
                                             aCAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGatgcggatgcgg                                                                                                      >  5:259698/1‑149 (MQ=255)
                                             aCAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGatgcggatgcgg                                                                                                      <  7:24720/149‑1 (MQ=255)
                                             aCAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCATCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGatgcggatgcgg                                                                                                      <  1:125080/149‑1 (MQ=255)
                                                 gtaggtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTg                                                                                                                     <  6:75566/130‑1 (MQ=255)
                                                 gtaggtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTg                                                                                                                     >  5:75566/1‑130 (MQ=255)
                                                 gtaggtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCgat                                                                                                                >  7:47080/1‑135 (MQ=255)
                                                 gtaggtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCgat                                                                                                                <  8:47080/135‑1 (MQ=255)
                                                  taggtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAAt                                                                                                 <  8:184028/149‑1 (MQ=255)
                                                  taggtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGAAGCGGGCAAt                                                                                                 >  1:293739/1‑149 (MQ=255)
                                                     gtTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCgg                                                                                              >  2:267733/1‑149 (MQ=255)
                                                      tttGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGt                                                                                             >  5:71435/1‑149 (MQ=255)
                                                           gAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTc                                                                                        >  3:233644/1‑149 (MQ=255)
                                                                gCAGCCGTCACCTAGTTGGCCGCTGACCGTTTCACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacgg                                                                                   >  1:37354/1‑149 (MQ=255)
                                                                 cAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacggc                                                                                  >  1:313250/1‑149 (MQ=255)
                                                                 cAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGCTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacggc                                                                                  >  2:295677/1‑149 (MQ=255)
                                                                 cAGCCGGCACCTAGTTGGCCGCGGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacgg                                                                                   <  4:102616/148‑1 (MQ=255)
                                                                  agacGTCACCTAGTTGGCCGCTGACCGTTACCCTGATGCCGTCGGCCTGGGGCACCGGGGTGTAGCGCACATCACCGGTGAATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGCTGGCTagacggag                                                                                 >  4:234169/4‑147 (MQ=255)
                                                                   gCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacggcga                                                                                <  1:155570/149‑1 (MQ=255)
                                                                     catCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacggcgacg                                                                              <  6:71435/147‑1 (MQ=255)
                                                                     cGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTcgacggcgacg                                                                              <  1:295677/149‑1 (MQ=255)
                                                                         aCCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTg                                                                           <  4:161024/148‑1 (MQ=255)
                                                                         aCCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAAACGGTGGCTCGACGGCGACGGTg                                                                           <  7:55532/148‑1 (MQ=255)
                                                                          ccTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGAc                                                                         <  2:112911/149‑1 (MQ=255)
                                                                           cTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGAcc                                                                        <  4:118649/149‑1 (MQ=255)
                                                                           cTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGAcc                                                                        >  6:110742/1‑149 (MQ=255)
                                                                           cTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGAcc                                                                        >  8:220240/1‑149 (MQ=255)
                                                                               ttGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGc                                                                    <  2:162294/149‑1 (MQ=255)
                                                                               ttGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGc                                                                    >  5:248561/1‑149 (MQ=255)
                                                                                    cGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGccacca                                                               <  3:173645/149‑1 (MQ=255)
                                                                                         aCCGTTTCACTGTTTGCGTCGGGCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCTGGCAATCGGTGGCTCGACGGCGACGGt                                                                            <  3:73556/131‑1 (MQ=255)
                                                                                         aCCGTTACACTGATGCCGTCGGCCTGGGGCATCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCAtt                                                          <  3:278883/149‑1 (MQ=255)
                                                                                         aCCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACcatca                                                            <  8:199178/147‑1 (MQ=255)
                                                                                         aCCGTTACACTGATGCCGTCGGCCTGGGCCACCGGGTTTTAGCGCACATCACCGGTGAATTTCTTAGAGGATACCGGCTTGACAGGGTTGTCGATGCGGATGCGGGCAAACGGTGCCTCGACGGCGAGGGt                                                                            >  4:73556/1‑131 (MQ=255)
                                                                                             ttACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTgcgc                                                      >  6:69660/1‑149 (MQ=255)
                                                                                             tgacacTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTgcgc                                                      <  4:140511/147‑1 (MQ=255)
                                                                                                 acTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCACGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCa                                                  >  1:310844/1‑149 (MQ=255)
                                                                                                     aTGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACg                                                <  2:313250/147‑1 (MQ=255)
                                                                                                     aTGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACg                                                >  6:131657/1‑147 (MQ=255)
                                                                                                     aTGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGCGACCTTGCCACCATCATTGCGCGCCACGaa                                              <  2:37354/149‑1 (MQ=255)
                                                                                                      tGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACTGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAg                                             <  2:293739/149‑1 (MQ=255)
                                                                                                      tGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCATAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGTTGACCATGACAACATCAATGCGCGCCAcc                                                >  6:252796/1‑145 (MQ=255)
                                                                                                          gTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAgcg                                           >  4:118911/1‑147 (MQ=255)
                                                                                                          gTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCa                                         >  4:48110/1‑149 (MQ=255)
                                                                                                          ctctaagaaatGCACCGGTGATGTGCGCTACAACCCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAgcg                                           <  5:321059‑M1/136‑1 (MQ=255)
                                                                                                           tCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAg                                        <  4:233644/149‑1 (MQ=255)
                                                                                                            ctaagaaatGCACCGGTGATGTGCGCTACAACCCGGTGCATTTCTTTGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGccacc                                                                >  4:269979‑M1/10‑124 (MQ=255)
                                                                                                            ctaagaaatGCACCGGTGATGTGCGCTACAACCCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGccacc                                                                <  3:269979‑M1/115‑1 (MQ=255)
                                                                                                            ctaagaaatGCACCGGTGATGTGCGCTACAACCCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGACGCGCAgg                                       <  6:43612‑M1/140‑1 (MQ=255)
                                                                                                              aagaaatGCACCGGTGATGTGCGCTACAACCCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGc                                     <  8:135701‑M1/142‑1 (MQ=255)
                                                                                                                   gggCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCtt                                  <  5:131657/147‑1 (MQ=255)
                                                                                                                    ggCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAg                               <  8:52295/149‑1 (MQ=255)
                                                                                                                    ggCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAg                               >  5:128228/1‑149 (MQ=255)
                                                                                                                      CACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGt                             >  6:248561‑M1/1‑149 (MQ=255)
                                                                                                                       ACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGtt                            >  1:267733‑M1/1‑149 (MQ=255)
                                                                                                                       ACCGGGGTGTAGCGCACATCACCGTTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGGCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGATGtt                            >  3:234169‑M1/1‑149 (MQ=255)
                                                                                                                          ccggtgatgtgcgctacaacccggtgcATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTg                           <  6:321059‑M2/122‑1 (MQ=255)
                                                                                                                           GGTTGTAGCGCACATCACCGGTGCAGTTCTTAGAGGCTACCCGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGAcc                        >  8:206143‑M1/1‑149 (MQ=255)
                                                                                                                                 tAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACcagcag                   >  7:319940/1‑149 (MQ=255)
                                                                                                                                          aTCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAg                                        <  5:38710/120‑1 (MQ=255)
                                                                                                                                          aTCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAg                                        >  6:38710/1‑120 (MQ=255)
                                                                                                                                          aTCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGAGGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCgg           >  4:110923/1‑149 (MQ=255)
                                                                                                                                            cACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGc         >  7:231237/1‑149 (MQ=255)
                                                                                                                                             aCCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGc         <  6:259698/148‑1 (MQ=255)
                                                                                                                                              ccggtgcATTTCTTAGAGGCTTCCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACTGTTAGTTTGCGACCATTATTGCGCGCGACGAAGCGCAGGGCCTTGAGGTTGACCAGCAgcgagtcttgttt       <  5:252796‑M2/142‑7 (MQ=255)
                                                                                                                                               cggtgcATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTg      <  5:69660‑M2/143‑1 (MQ=255)
                                                                                                                                                 gtgcATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCAtt                                                          >  7:46430‑M2/5‑95 (MQ=255)
                                                                                                                                                 gtgcATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCAtt                                                          <  8:46430‑M2/91‑1 (MQ=255)
                                                                                                                                                    cATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTGACCa  <  7:220240‑M2/147‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
TTGCGCGCACGGCACCGGCGGCGTAGGTGGAATGGTCGAGCAGTGACAGGTAGGTTTGCGAGTTGCAGCCGTCACCTAGTTGGCCGCTGACCGTTACACTGATGCCGTCGGCCTGGGGCACCGGGTTGTAGCGCACATCACCGGTGCATTTCTTAGAGGCTACCGGCTTGACCTGGTTGTCGATGCGGATGCGGGCAATCGGTGGCTCGACGGCGACGGTGACCTTGCCACCATCATTGCGCGCCACGAAGCGCAGGGCCTTGAGGTTGACCAGCAGCGAGTCGGGCTTGACCA  >  NC_002947/2394624‑2394917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.