| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2642094 = | 58 (1.030) | 6 (0.110) | 6/248 | NT | 9.7% | coding (357/1407 nt) | PP_2312 | lytic transglycosylase family protein |
| ? | NC_002947 | 2642131 = | 56 (1.030) | coding (394/1407 nt) | PP_2312 | lytic transglycosylase family protein | |||||
TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2642242‑2642094‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGCCAG > NC_002947/2642131‑2642243 TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAG < 5:357879/145‑1TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAG > 6:357879/1‑145 ACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑TCGC‑CCG‑‑GCGCGGCCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGG < 1:100640/143‑1 ACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑TCGC‑CCG‑‑GCGCGGCCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGG > 2:100640/1‑143 TGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTG < 7:42774/134‑1 TGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTG > 8:42774/1‑134 GCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGC > 8:283070/1‑147 CTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGCCAG > 2:132583/1‑149 TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2642242‑2642094‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGCCAG > NC_002947/2642131‑2642243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |