New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2642094 = | 58 (1.030) | 6 (0.110) | 6/248 | NT | 9.7% | coding (357/1407 nt) | PP_2312 | lytic transglycosylase family protein |
? | NC_002947 | 2642131 = | 56 (1.030) | coding (394/1407 nt) | PP_2312 | lytic transglycosylase family protein |
TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2642242‑2642094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGCCAG > NC_002947/2642131‑2642243 TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAG < 5:357879/145‑1 TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAG > 6:357879/1‑145 ACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑TCGC‑CCG‑‑GCGCGGCCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGG < 1:100640/143‑1 ACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑TCGC‑CCG‑‑GCGCGGCCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGG > 2:100640/1‑143 TGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTG < 7:42774/134‑1 TGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTG > 8:42774/1‑134 GCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGC > 8:283070/1‑147 CTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGCAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGCCAG > 2:132583/1‑149 TGGCACTGGTCAGGGCCACGGTACGCCCTGACAGCTGTTCGACCTTGCTGAAACTTCGCTCGCCTTTGCGCCCGACCAGCATCAGCGGCACCTGGTCGAGTATCGGTGCACTGCTGCGGACACCGCTCACCGTAGTGGGGTCAAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2642242‑2642094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAGTGCACCGATACTCGACCAGGTGCCGCTGATGCTGGTCGGGCGCAAAGGCGAGCGAAGTTTCAGCAAGGTCGAACAGCTGTCAGGGCGTACCGTGGCCCTGACCAGTGCCAG > NC_002947/2642131‑2642243 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |