| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2698379 = | 38 (0.670) | 3 (0.050) | 3/250 | NT | 7.8% | intergenic (‑83/+59) | PP_2364/PP_2365 | hypothetical protein/AraC family transcriptional regulator |
| ? | NC_002947 | 2698420 = | 34 (0.620) | intergenic (‑124/+18) | PP_2364/PP_2365 | hypothetical protein/AraC family transcriptional regulator | |||||
GGCGGGGGCCTTGGGCTATGACAGCCCAAGTGCCTTCGCCAGCATGTTCAAGCGCCAGTTCGGTACCACGCCCAGTCAGTTCTTCAGATAACCTGAAGTCCACGCATTTGCCGGCACTGGCCCGCCGCATACGGGCTGTCCGCTGACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2698528‑2698379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGCCCCCGCCACATCGATGA > NC_002947/2698420‑2698538 GGCGGGGGCCTTGGGCTATGACAGCCCAAGTGCCTTCGCCAGCATGTTCAAGCGCCAGTTCGGTACCACGCCCAGTCAGTTCTTCAGATAACCTGAAGTCCACGCATTTGCCGGCACTGGCCCGCCGCATACGGGCTGTCCGCTGACGG > 3:198941/1‑149 GCATTTGCCGGCACTGGCCCGCCGCATACGGGCTGTCCGCTGACGGCAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGC > 5:190103/1‑149 ATTTGCCGGCACTGGCCCGCCGCATACGGGCTGTCCGCTGACGGCAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGCCC > 5:364155/1‑149 GCCGGCACTGGCCCGCCGCATACGGGCTGTCCGCTGACGGCAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGCCCCCGC > 3:177764/1‑149 GCAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGCCCCCGCCACATCGATGA < 3:158827/121‑1 GCAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGCCCCCGCCACATCGATGA > 4:158827/1‑121 GGCGGGGGCCTTGGGCTATGACAGCCCAAGTGCCTTCGCCAGCATGTTCAAGCGCCAGTTCGGTACCACGCCCAGTCAGTTCTTCAGATAACCTGAAGTCCACGCATTTGCCGGCACTGGCCCGCCGCATACGGGCTGTCCGCTGACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2698528‑2698379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcAAATGCGTGGACTTCAGGTTATCTGAAGAACTGACTGGGCGTGGTACCGAACTGGCGCTTGAACATGCTGGCGAAGGCACTTGGGCTGTCATAGCCCAAGGCCCCCGCCACATCGATGA > NC_002947/2698420‑2698538 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |