New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3146296 = | 51 (0.900) | 3 (0.060) | 3/246 | NT | 6.1% | coding (719/987 nt) | PP_2761 | ribose ABC transporter permease |
? | NC_002947 | 3146335 = | 44 (0.820) | coding (758/987 nt) | PP_2761 | ribose ABC transporter permease |
GCCGTTACGTTGAGAAATAGCACACCGAGCAGTGTACCGGGTACGTTGACCCGGTTGTGCAGGCTCAACGTGGCACCGATGAAGACCGCACCGATGGCATTCATCAGGAAGGCATTGCCGGACATCGGCGCGTAGGCGTTCACCGTGGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3146449‑3146296 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaATGCCTTCCTGATGAATGCCATCGGTGCGGTCTTCATCGGTGCCACGTTGAGCCTGCACAACCGGGTCAACGTACCCGGTACACTGCTCGGTGTGCTATTTCTCAACGTAACGGCCAACGGTCTGCTGCTGATCGGCTGGAATTTC > NC_002947/3146335‑3146480 GCCGTTACGTTGAGAAATAGCACACCGAGCAGTGTACCGGGTACGTTGACCCGGTTGTGCAGGCTCAACGTGGCACCGATGAAGACCGCACCGATGGCATTCATCAGGAAGGCATTGCCGGACATCGGCGCGTAGGTGTTCACCGTGGC < 2:65316/149‑1 ACGTTGAGAAATAGCACACCGAGCAGTGTACCGGGTACGTTGACCCGGTTGTGCAGGCTCAACGTGGCACCGATGAAGACCGCACCGATGGCATTCATCAGGAAGGCATTGCCGGACATCGGCGCGTAGGCGTTCACCGTGGCCGGCA < 4:289036/148‑1 TTGCCGGACATCGGCGCGTAGGCGTTCACCGTGGCCGGCAATGCGTTCCTGATGAATGCCATCGGTGCGGTCTTCATCGGTGCCACGTTGAGCCTGCACAACCGGGTCAACGTACCCGGTACACTGCTCGGTGTGCTATTTCTCAACG > 7:273196/1‑148 GGACATCGGCGCGTAGGCGTTCACCGTGGCCGGCAATGCCTTCCTGATGAATGCCATCGGTGCGGTCTTCATCGGTGCCACGTTGAGCCTGCACAACCGGGTCAACGTACCCGGTACACTGCTCGGTGTGCTATTT < 5:228885/136‑1 GGACATCGGCGCGTAGGCGTTCACCGTGGCCGGCAATGCCTTCCTGATGAATGCCATCGGTGCGGTCTTCATCGGTGCCACGTTGAGCCTGCACAACCGGGTCAACGTACCCGGTACACTGCTCGGTGTGCTATTT > 6:228885/1‑136 GCAATGCCTTCCTGATGAATGCCATCGGTGCGGTCTTCATCGGTGCCACGTTGAGCCTGCACAACCGGGTCAACGTACCCGGTACACTGCTCGGTGTGCTATTTCTCAACGTAACGGCCAACGGTCTGCTGCTGATCGGCTGGAATTTC > 2:110732/1‑149 GCCGTTACGTTGAGAAATAGCACACCGAGCAGTGTACCGGGTACGTTGACCCGGTTGTGCAGGCTCAACGTGGCACCGATGAAGACCGCACCGATGGCATTCATCAGGAAGGCATTGCCGGACATCGGCGCGTAGGCGTTCACCGTGGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3146449‑3146296 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcaATGCCTTCCTGATGAATGCCATCGGTGCGGTCTTCATCGGTGCCACGTTGAGCCTGCACAACCGGGTCAACGTACCCGGTACACTGCTCGGTGTGCTATTTCTCAACGTAACGGCCAACGGTCTGCTGCTGATCGGCTGGAATTTC > NC_002947/3146335‑3146480 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |