| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3377448 = | 50 (0.880) | 3 (0.060) | 3/244 | NT | 5.7% | coding (568/906 nt) | tnpB | transposase subunit B |
| ? | NC_002947 | 3377486 = | 52 (0.970) | coding (606/906 nt) | tnpB | transposase subunit B | |||||
GAGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3377600‑3377448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > NC_002947/3377486‑3377631 GAGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGG < 5:192290/148‑1 AGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGG < 3:146540/149‑1 GGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGG < 3:89874/148‑1 GATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGT > 7:103130/1‑119 GATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGT < 8:103130/119‑1 GAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCACCGG > 8:279408/1‑149 tGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCTGTGACAGCTACGACAACTCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAG < 1:261188/148‑1 GGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAG < 7:279408/149‑1 CTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGGCCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > 8:70660/1‑149 GAGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3377600‑3377448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > NC_002947/3377486‑3377631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |