| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3463005 | 48 (0.850) | 3 (0.060) | 3/246 | NT | 6.7% | coding (1353/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 3463061 | 38 (0.700) | coding (1297/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein | |||||
GGCCGAGTCGACGTTGCGGATATTCAGGGTCACGCCGATCTGGGCCAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3462852‑3463005‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggggATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAGGCGACCGCCTGGTCAATAGCCAGGGCACGCCGCTGGCGTTCACGTTCCTCAATGGCCAGGCGGGCCTTGAACGCCTGCTGCTGC < NC_002947/3463061‑3462914 GGCCGAGTCGACGTTGCGGATATTCAGGGTCACGCCGATCTGGGCCAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTT > 1:308375/1‑149GGCCGAGTCGACGTTGCGGATATTCAGGGTCACGCCGATCTGGGCCAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTT > 3:48335/1‑149 cgGAGTGGACGTTGCGGATATTCAGGGTCACGCCGATCTGGGCCAGGTGGCGCTGCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCTGGCGGTCGCCTTCG < 3:52766/147‑1 CCGAGTCGACGTTGCGGATATTCAGGGTCACGCCGATCTGGGACAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCAGCCTGGCCATTGACGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCTGTCGCCTTCc > 4:52766/1‑148 TTCAGGGTCACGCCGATCTGGGCCAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCG > 1:359289/1‑129 TTCAGGGTCACGCCGATCTGGGCCAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCG < 2:359289/129‑1 CGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCGGGGATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAGGCGA < 6:302658/149‑1 CCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCGGGGATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAG < 7:312683/136‑1 CCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCGGGGATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAG > 8:312683/1‑136 TCGGGGATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAGGCGACCGCCTGGTCAATAGCCAGGGCACGCCGCTGGCGTTCACGTTCCTCAATGGCCAGGCGGGCCTTGAACGCCTGCT > 3:194082/1‑149 GGGATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAGGCGACCGCCTGGTCAATAGCCAGGGCACGCCGCTGGCGTTCACGTTCCTCAATGGCCAGGCGGGCCTTGAACGCCTGCTGCT > 3:262132/1‑149 GATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAGGCGACCGCCTGGTCAATAGCCAGGGCACGCCGCTGGCGTTCACGTTCCTCAATGGCCAGGCGGGCCTTGAACGCCTGCTGCTGC > 3:75337/1‑149 GGCCGAGTCGACGTTGCGGATATTCAGGGTCACGCCGATCTGGGCCAGGTTGCGCTTCCACGGCAGCAGCAGGCGTTCAAGGCCCGCCTGGCCATTGAGGAACGTGAACGCCAGCGGCGTGCCCTGGCTATTGACCAGGCGGTCGCCTTCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3462852‑3463005‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggggATCATCCGTCAACAGCAGTTGCAGGCCCTGGCCCTGCTCGAACAAGCCGGCTGGCACCCCGAAGGCGACCGCCTGGTCAATAGCCAGGGCACGCCGCTGGCGTTCACGTTCCTCAATGGCCAGGCGGGCCTTGAACGCCTGCTGCTGC < NC_002947/3463061‑3462914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |