New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4028796 =	50 (0.880)	4 (0.070)	4/250	NT	7.8%	coding (174/1623 nt)	PP_3553	AMP‑binding domain‑containing protein
	?	NC_002947	4028828 =	46 (0.840)					coding (206/1623 nt)	PP_3553	AMP‑binding domain‑containing protein

AGGCGATGGCCTCGGCATCCAGGCGCACGTTCAGGGTATTGAGCACGGCACCGGTCATGGGTACGCCGAAGTGCGCCTCGAGCATGGTCGGGGTGTTGGGCAGCATCACTGCCACGGTGTCGCCACGGCCGATGCCACGGC‑‑CGGCCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4028947‑4028796 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACACCGTGGCAGTGATGCTGCCCAACACCCCGACCATGCTCGAGGCGCACTTCGGCGTACCCATGACCGGTGCCGTGCTCAATACCCTGAACGTGCGCCTGGATGCCGAGGCCATC  >  NC_002947/4028828‑4028943                                                                                                                                                                                                                                                                                AGGCGATGGCCTCGGCATCCAGGCGCACGTTCAGGGTATTGAGCACGGCACCGGTCATGGGTACGCCGAAGTGCGCCTCGAGCATGGGCGGGGTGTTGGGCAGCATCACTGCCACGGTGTCGCCACGGCCGATGCCACGGC‑‑CGGCCAGG                                                                                                                         <  1:320773/149‑1                                          AGCACGGCACCGGTCATGGGTACGCCGAAGTGCGCCTCGAGCATGGTCGGGGTGTTGGGCAGCATCACTGCCACGGTGTCGCCCTGGCCG‑‑GCCGTGGCATCGGCCGTGGCGACACCGTGGCAGTGA                                                                                                       >  3:219169/1‑126                                          AGCACGGCACCGGTCATGGGTACGCCGAAGTGCGCCTCGAGCATGGTCGGGGTGTTGGGCAGCATCACTGCCACGGTGTCGCCCTGGCCG‑‑GCCGTGGCATCGGCCGTGGCGACACCGTGGCAGTGA                                                                                                       <  4:219169/126‑1                                                                                                              TGCCACGGTGTCGCCACGGCCGATGCCACGGC‑‑CGGCCAGGGCGACACCGTGGCAGTGATGCTGCCCAACACCCCGACCATGCTCGAGGCGCACTTCGGCGTACCCATGACCGGTGCCGTGCTCAATACCCTGAACGTGCGCCTGGATGC            >  2:135966/1‑149                                                                                                                        TCGCCACGGCCGATGCCACGGC‑‑CGGCCAGGGCGACACCGTGGCAGTGATGCTGCCCAACACCCCGACCATGCTCGAGGCGCACTTCGGCGTACCCATGACCGGTGCCGTGCTCAATACCCTGAACGTGCGCCTGGATGCCGAGGCCATC  <  1:135966/149‑1                                                                                                                                                                                                                                                                                AGGCGATGGCCTCGGCATCCAGGCGCACGTTCAGGGTATTGAGCACGGCACCGGTCATGGGTACGCCGAAGTGCGCCTCGAGCATGGTCGGGGTGTTGGGCAGCATCACTGCCACGGTGTCGCCACGGCCGATGCCACGGC‑‑CGGCCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4028947‑4028796 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACACCGTGGCAGTGATGCTGCCCAACACCCCGACCATGCTCGAGGCGCACTTCGGCGTACCCATGACCGGTGCCGTGCTCAATACCCTGAACGTGCGCCTGGATGCCGAGGCCATC  >  NC_002947/4028828‑4028943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.