New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4408984 =	36 (0.640)	4 (0.080)	4/236	NT	9.6%	coding (1330/1398 nt)	PP_3893	DNA helicase
	?	NC_002947	4409058 =	42 (0.810)					coding (1256/1398 nt)	PP_3893	DNA helicase

ACCGCGATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4409139‑4408984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaggcagTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGGATGATGTCGGCGTCTTGCTCGATCTCGCCCGAGTCGCGCAGGTCGGACATCTGGG  >  NC_002947/4409058‑4409205                                                                                                                                                                                                                                                                                                                  ACCGCGATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGCCCACTGACTGCTGCAGCATCAGGGCGAGTTCGCCCGGTATGCCAACTACGCCGGAGCTCGCGAGCAGCAG                                                                                                                                                             >  1:233418/1‑149  CCGCGATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAG                                                                                                                                                             >  3:283846/1‑148   CGCGATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCA                                                                                                                                                           <  6:292747/149‑1   CGCGATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAG                                                                                                                                                             >  5:1277/1‑147      GATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGC                                                                                                                                                        <  2:356202/149‑1                                                      GTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCA                                                                                                                                                           >  7:319220/1‑98                                                      GTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCA                                                                                                                                                           <  8:319220/98‑1                                                                                   CTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGC                                                                            >  8:267180/1‑148                                                                                    TGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCAT                                                                          >  5:241725/1‑149                                                                                                    AGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGGAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCA                                                           <  7:267180/148‑1                                                                                                     GGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGG                                                         <  6:241725/149‑1                                                                                                                                                    AGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGGATGATGTCGGCGTCTTGCT                                      <  5:101390/121‑1                                                                                                                                                    AGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGGATGATGTCGGCGTCTTGCT                                      >  6:101390/1‑121                                                                                                                                                     GCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGGATGATGTCGGCGTCTTGCTCGATCTCGCCCGAGTCGCGCAGGTCGGAC         <  2:160117/149‑1                                                                                                                                                            GTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGGATGATGTCGGCGTCTTGCTCGATCTCGCCCGAGTCGCGCAGGTCGGACATCTGGG  <  6:132939/149‑1                                                                                                                                                                                                                                                                                                                  ACCGCGATGCCGATTCGGACTTGGGCCAGAGCGGCGTTACCGAGATCGATGTGGTCAAGCACCGTCACGCGCCTGTCGGCCACTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4409139‑4408984 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaggcagTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATCGGCATCGCGGTGGGCGATCAGGATGATGTCGGCGTCTTGCTCGATCTCGCCCGAGTCGCGCAGGTCGGACATCTGGG  >  NC_002947/4409058‑4409205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.