New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4408984 =	36 (0.640)	4 (0.080)	4/236	NT	9.6%	coding (1330/1398 nt)	PP_3893	DNA helicase
	?	NC_002947	4409058 =	42 (0.810)					coding (1256/1398 nt)	PP_3893	DNA helicase

TGGGTTGGTGGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATC  >  NC_002947/4408836‑4409128                                                                                                                                                     |                                                                                                                                                 cccagatgtccgacctgcgcgactcgggcgagatcgagcaagacgccgacatcatcctgatcgcccaccgcgatgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccac                                                                                                                                                  <  6:132939‑M1/1‑1 (MQ=255)    gTTGGTGGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGctgctgc                                                                                                                                               >  5:214740/1‑149 (MQ=255)        gtccgacctgcgcgactcgggcgagatcgagcaagacgccgacatcatcctgatcgcccaccgcgatgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccactgcctgc                                                                                                                                           <  2:160117‑M1/8‑1 (MQ=255)                gTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTc                                                                                                                                   >  6:288071/1‑149 (MQ=255)                 tCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTcg                                                                                                                                  <  5:288071/149‑1 (MQ=255)                   cagcagGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGACCCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTcgc                                                                                                                                 >  5:203375/1‑148 (MQ=255)                   cagcagGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTcgc                                                                                                                                 <  2:218032/148‑1 (MQ=255)                    agcagGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGa                                                                                                                               <  6:214740/149‑1 (MQ=255)                     gcagGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAg                                                                                                                              >  4:258682/1‑149 (MQ=255)                            gCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGctgctgc                                                                                                                                               >  8:156279/1‑125 (MQ=255)                            gCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGctgctgc                                                                                                                                               <  7:156279/125‑1 (MQ=255)                                  gCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGtt                                                                                                                 <  7:82737/149‑1 (MQ=255)                                     gTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGTTGCTGCTCGCGAGCTCCGGCGTAGTTGGc                                                                                                              <  1:25865/149‑1 (MQ=255)                                     agcaagacgccgacatcatcctgatcgcccaccgcgatgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccaCTGCctgct                                                                                                                                          >  6:101390‑M1/113‑121 (MQ=255)                                     agcaagacgccgacatcatcctgatcgcccaccgcgatgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccaCTGCctgct                                                                                                                                          <  5:101390‑M1/9‑1 (MQ=255)                                          gcgcGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAAcc                                                                                                         >  1:232835/1‑149 (MQ=255)                                                 gCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTc                                                                                                                           >  8:295739/1‑124 (MQ=255)                                                 gCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTc                                                                                                                           <  7:295739/124‑1 (MQ=255)                                                        cctgatcgcccaccgcgatgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccaCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGccc                                                                                           <  6:241725‑M1/56‑1 (MQ=255)                                                         cGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGccc                                                                                           <  7:239181/148‑1 (MQ=255)                                                          tgatcgcccaccgcgatgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccaCTGCCTGCTCCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCt                                                                                          <  7:267180‑M1/57‑1 (MQ=255)                                                          ggTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCt                                                                                          >  2:32721/1‑148 (MQ=255)                                                           gTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCggg                                                                                                      <  8:284553/135‑1 (MQ=255)                                                           gTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCggg                                                                                                      >  7:284553/1‑135 (MQ=255)                                                                ttCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGAtgctg                                                                                   >  1:39560/1‑149 (MQ=255)                                                                         atgccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccaCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAgcaggca                                                                          >  5:241725‑M1/77‑149 (MQ=255)                                                                           gccgattcggacttgggccagagcggcgttaccgagatcgatgtggtcaagcaccgtcacgcgcctgtcggccaCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAgcaggcag                                                                         >  8:267180‑M1/75‑148 (MQ=255)                                                                           gcagcaTCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGt                                                                        >  5:205588/1‑149 (MQ=255)                                                                            cagcaTCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTg                                                                       >  2:184759/1‑149 (MQ=255)                                                                              gcaTCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGc                                                                     <  5:195956/149‑1 (MQ=255)                                                                                    gAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTACCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAg                                                               >  2:201734/1‑149 (MQ=255)                                                                                        ctctCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTg                                                                                                                >  4:184045/1‑96 (MQ=255)                                                                                        ctctCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTg                                                                                                                <  3:184045/96‑1 (MQ=255)                                                                                        ctctCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGgcgc                                                           >  6:349173/1‑149 (MQ=255)                                                                                            ccccTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGGCCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGa                                                       >  5:55821/1‑149 (MQ=255)                                                                                                  gctggAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGc                                                 <  5:349173/149‑1 (MQ=255)                                                                                                   ctggAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCt                                                >  6:190692/1‑149 (MQ=255)                                                                                                       aaGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGAc                                            >  7:217100/1‑149 (MQ=255)                                                                                                        aGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGAcc                                           <  3:258682/149‑1 (MQ=255)                                                                                                             ttCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACAt                                       <  5:190692/148‑1 (MQ=255)                                                                                                                           ggaggaCCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGAGCTCGGTAAcgc                        >  4:283846/1‑149 (MQ=255)                                                                                                                             aggaCCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACcac                                         <  5:241361/130‑1 (MQ=255)                                                                                                                             aggaCCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACcac                                         >  6:241361/1‑130 (MQ=255)                                                                                                                                  cTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTg                 >  6:1277/1‑149 (MQ=255)                                                                                                                                     cGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGcc              >  6:254983/1‑149 (MQ=255)                                                                                                                                     cGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGcc              <  1:184759/149‑1 (MQ=255)                                                                                                                                            gTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCTCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTcc       >  5:250527/1‑149 (MQ=255)                                                                                                                                                 gctgctGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCTCCCTGATGCTGCAGCAGGCAGTGGCCGACAGCCGCGTGACGGTCCTTGACAACATCGATCTCTGTAACGCCGCTCTGGCCCAAGTCAGAATc  >  2:233418/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 TGGGTTGGTGGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCTGCTCGCGAGCTCCGGCGTAGTTGGCAAACCGGGCGAACTCGCCCTGATGCTGCAGCAGGCAGTGGCCGACAGGCGCGTGACGGTGCTTGACCACATCGATCTCGGTAACGCCGCTCTGGCCCAAGTCCGAATC  >  NC_002947/4408836‑4409128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.