| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4670530 = | 49 (0.870) | 4 (0.070) | 4/244 | NT | 8.1% | coding (862/1470 nt) | nuoN | NADH‑quinone oxidoreductase subunit N |
| ? | NC_002947 | 4670606 = | 44 (0.820) | coding (938/1470 nt) | nuoN | NADH‑quinone oxidoreductase subunit N | |||||
GGTGATCACGTAGGTGACCAGGTAAACGCCCATGGCTTCCAGGGCCAGGCCCTTGCTGGCGACCAACGCGATGACCAGGTAACCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGTTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4670682‑4670530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttaccTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCACCTACGTGATCACCAGCCTGGGCGCCTTCGGCGTCATCACCCTCATGTCCTCGCCATACGGCGGCCGTGACGCCGATGCCCTGTA > NC_002947/4670606‑4670753 GGTGATCACGTAGGTGACCAGGTAAACGCCCATGGCTTCCAGGGCCAGGCCCTTGCTGGCGACCAACGCGATGACCAGGTAACCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGT > 7:289150/1‑149 GATCACGTAGGTGACCAGGTAAACGCCCATGGCTTCCAGGGCCAGGCCCTTGCTGGCGACCAACGCGATGACCAGGTAACCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGTTAC > 5:322929/1‑149 GGTAACCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGTTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCACCTACGTGAT > 4:227431/1‑149 CCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGTTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGT < 1:354581/132‑1 CCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGTTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGT > 2:354581/1‑132 GTCAGCGCCAGCAGGTTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCACCTACGTGATCACCAGCCTGGGCGCCTTCGGCGTCATCACCCTCATGTCCTCGCCATACGGCGGCC < 3:227431/149‑1 GTTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCACCTACGTGATCACCAGCCTGGGCGCCTTCGGCGTCATCACCCTCATGTCCTCGCCATACGGCGGCCGTGACGCCGATGCC < 3:285953/149‑1 TTACCTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCACCTACGTGATCACCAGCCTGGGCGCCTTCGGCGTCATCACCCTCATGTCCTCGCCATACGGCGGCCGTGACGCCGATGCCC < 8:297627/149‑1 CTGGTCATCGCGTTGGTCGCCATAAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACATGGTCACCTACGTGATCACCAGCCTGGGCGCCTACGGCGACAACACCCAAATGTCAACGACATACGGCAGCCGTGACGCCGAAGCCaagaa > 7:227759/1‑144 GGTGATCACGTAGGTGACCAGGTAAACGCCCATGGCTTCCAGGGCCAGGCCCTTGCTGGCGACCAACGCGATGACCAGGTAACCGAAGTGGGCGATGGACGAGTAACCCAGCAGACGCTTGAGGTTGCTCTGGGTCAGCGCCAGCAGGTTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4670682‑4670530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttaccTGGTCATCGCGTTGGTCGCCAGCAAGGGCCTGGCCCTGGAAGCCATGGGCGTTTACCTGGTCACCTACGTGATCACCAGCCTGGGCGCCTTCGGCGTCATCACCCTCATGTCCTCGCCATACGGCGGCCGTGACGCCGATGCCCTGTA > NC_002947/4670606‑4670753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |