New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4776426 | 42 (0.740) | 3 (0.060) | 3/248 | NT | 6.5% | coding (2841/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4776460 | 46 (0.850) | coding (2807/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
AGCGCCTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGTGGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4776274‑4776426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcTGGCAGGCTATATCGTGCCGTACGATGCCAGCCTGCTGCAGGCTGATGCCGAGGTTCAGGAAACCCTGCGCCTGGCACTCAAGGCCCACGCATTGAAGTCGATGCCGGACTACATGGTGCCGACCCACCTGGTGTTCATTCCACGC < NC_002947/4776460‑4776315 AGCGCCTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGTGGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTG < 4:98258/149‑1 AACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCTGGCAGGCTATATCGTGCCGTACGATGCCAGCCTGCTGCAG < 5:191448/143‑1 AACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCTGGCAGGCTATATCGTGCCGTACGATGCCAGCCTGCTGCAG > 6:191448/1‑143 GCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGCTGGCAGGCTATATCGTGCCGTACGATGCCAGCCTGCTGCAGGCTGA > 8:82969/1‑132 AGCTGGCAGGCTATATCGTGCCGTACGATGCCAGCCTGCTGCAGGCTGATGCCGAGGTTCAGGAAACCCTGCGCCTGGCACTCAAGGCCCACGCATTGAAGTCGATGCCGGACTACATGGTGCCGACCCACCTGGTGTTCATTCCACGC < 4:47926/149‑1 AGCGCCTTGCGGTCGAGCTTGCCGTTGGGGGTCAGCGGCATGCGTGGAATGAACACCAGGTGGGTCGGCACCATGTAGTCCGGCATCGACTTCAATGCGTGGGCCTTGAGTGCCAGGCGCAGGGTTTCCTGAACCTCGGCATCAGCCTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4776274‑4776426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcTGGCAGGCTATATCGTGCCGTACGATGCCAGCCTGCTGCAGGCTGATGCCGAGGTTCAGGAAACCCTGCGCCTGGCACTCAAGGCCCACGCATTGAAGTCGATGCCGGACTACATGGTGCCGACCCACCTGGTGTTCATTCCACGC < NC_002947/4776460‑4776315 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |