| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5175709 = | 42 (0.740) | 3 (0.060) | 3/248 | NT | 5.8% | coding (512/945 nt) | PP_4551 | alpha/beta family hydrolase |
| ? | NC_002947 | 5175751 = | 57 (1.050) | coding (554/945 nt) | PP_4551 | alpha/beta family hydrolase | |||||
CTGCAGCAGATCGAGCCACAACTGGTTGGTGCAGCGAAAGCCGCACAACGGGTCATTCACGTACTGATCGACCTCGCCCGGGTCGCGGCTGAGCCAGTCGAAGGCCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5175860‑5175709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccGCACGGCCTTCGACTGGCTCAGCCGCGACCCGGGCGAGGTCGATCAGTACGTGAATGACCCGTTGTGCGGCTTTCGCTGCACCAACCAGTTGTGGCTCGAT > NC_002947/5175751‑5175851 CTGCAGCAGATCGAGCCACAACTGGTTGGTGCAGCGAAAGCCGCACAACGGGTCATTCACGTACTGATCGACCTCGCCCGGGTCGCGGCTGAGCCAGTCGAAGGCCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGAC > 3:112237/1‑148 CAGCAGATCGAGCCACAACTGGTTGGTGCAGCGAAAGCCGCACAACGGGTCATTCACGTACTGATCGACCTCGCCCGGGTCGCGGCTGAGCCAGTCGAAGGCCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAA < 4:328050/147‑1 ACCTCGCCCGGGTCGCGGCTGAGCCAGTCGAAGGCCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAA < 5:322047/80‑1 ACCTCGCCCGGGTCGCGGCTGAGCCAGTCGAAGGCCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAA > 6:322047/1‑80 CCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAACCGCACGGCCTTCGACTGGCTCAGCCGCGACCCGGGCGAGGTCGATCAGTACGTGAATGACCCGTTGTGCGGCTTTCGCTGCACCAACCAGTTGTGGCTCGAT > 8:79345/1‑149 CGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAACCGCACGGCCTTCGACTGGCTCAGCCGCGACCCGGGCGAGGTCGATCAGTACGTGAATGACCCGTTGTGCGG > 3:97560/1‑117 CGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAACCGCACGGCCTTCGACTGGCTCAGCCGCGACCCGGGCGAGGTCGATCAGTACGTGAATGACCCGTTGTGCGG < 4:97560/117‑1 CTGCAGCAGATCGAGCCACAACTGGTTGGTGCAGCGAAAGCCGCACAACGGGTCATTCACGTACTGATCGACCTCGCCCGGGTCGCGGCTGAGCCAGTCGAAGGCCGTGCGGTTGGGCTTGAAGGCGTTGTTGAACGAACCGAAGGACAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5175860‑5175709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccGCACGGCCTTCGACTGGCTCAGCCGCGACCCGGGCGAGGTCGATCAGTACGTGAATGACCCGTTGTGCGGCTTTCGCTGCACCAACCAGTTGTGGCTCGAT > NC_002947/5175751‑5175851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |