| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5205778 = | 51 (0.900) | 4 (0.070) | 4/246 | NT | 7.6% | coding (655/1209 nt) | PP_4586 | hypothetical protein |
| ? | NC_002947 | 5205848 = | 49 (0.910) | coding (585/1209 nt) | PP_4586 | hypothetical protein | |||||
TTCGATCGCCCGACCGGCTGGATGCTTGCCGGCGACCTGGGCAGCCGCCGCGCTCGCCTGGGCGAGACCGAAGTGACCGTGGCCGCGCCGGTGGGGCAGGGCATGCGGCGCATGGACAGCCTGACCTTGCTCACATTCGTCTGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5205925‑5205778‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccacGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTC > NC_002947/5205848‑5205995 TTCGATCGCCCGACCGGCTGGATGCTTGCCGGCGACCTGGGCAGCCGCCGCGCTCGCCTGGGCGAGACCGAAGTGACCGTGGCCGCGCCGGTGGGGCAGGGCATGCGGCGCATGGACAGCCTGACCTTGCTCACATTCGTCTGGCCAC < 2:265205/148‑1 GGGCAGCCGCCGCGCTCGCCTGGGCGAGACCGATGTGACCGTGGCCGCGGCGGTGGGGCAGGGCATGCGGCGCATGGACAGCCTGACCTTGCTGACATTCGTCTGGACAC > 6:292333/1‑110 GGGCAGCCGCCGCGCTCGCCTGGGCGAGACCGAAGTGACAGAGCCCGCGGCGGTGGGGCAGGGAATGCGGCGCATGGACAGCCAGACCTTGCTCACAATCGTCTGGCCAC < 5:292333/110‑1 ACCGTGGCCGCGCCGGTGGGGCAGGGCATGCGGCGCATGGACAGCCTGACCTTGCTCACATTCGTCTGGCCACGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATC > 6:312506/1‑148 CGTGGCCGCGCCGGTGGGGCAGGGCATGCGGCGCATGGACAGCCTGACCTTGCTCACATTCGTCTGGCCACGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCACAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAA > 8:32670/1‑149 CGGCGCATGGACAGCCTGACCTTGCTCACATTCGTCTGGCCACGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAA < 7:32670/148‑1 CTCACATTCGTCTGGCCACGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCA < 5:312506/148‑1 GGCCACGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGC < 6:207548/149‑1 CACGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCTGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCT > 3:315950/1‑149 CGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTC < 3:239363/149‑1 CGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTC < 4:145881/149‑1 TTCGATCGCCCGACCGGCTGGATGCTTGCCGGCGACCTGGGCAGCCGCCGCGCTCGCCTGGGCGAGACCGAAGTGACCGTGGCCGCGCCGGTGGGGCAGGGCATGCGGCGCATGGACAGCCTGACCTTGCTCACATTCGTCTGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5205925‑5205778‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccacGGTCACTTCGGTCTCGCCCAGGCGAGCGCGGCGGCTGCCCAGGTCGCCGGCAAGCATCCAGCCGGTCGGGCGATCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTC > NC_002947/5205848‑5205995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |