New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5414165 =	39 (0.690)	3 (0.060)	3/240	NT	7.9%	coding (5/2394 nt)	PP_4755	ferrichrome‑iron receptor
	?	NC_002947	5414243 =	34 (0.650)					intergenic (‑74/+142)	PP_4755/gabP‑V	ferrichrome‑iron receptor/gamma‑aminobutyrate permease

GTTTGGATTAACAGGTGCTCGCAGGTACCCGCCCCGCTAGCGCAATTCATTGAAAATAAATGAGGTGTTTTCTCATTCTCGTTCGGCATGTAGAGAAGGCCGGATTACAGGCCAGCCCGCCGACCCCCGACACGGAGCGAGAGAATGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5414313‑5414165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagaatgagAAAACACCTCATTTATTTTCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGAGCACCTGTTAATCCAAACGCTCTCTCAAACCAAAAAACAAAGGGCACCCATCCTCGGGCGCCCTTTGCCTTACAGCCAGGTGAACTGAA  >  NC_002947/5414243‑5414384                                                                                                                                                                                                                                                                                                     GTTTGGATTAACAGGTGCTCGCAGGTACCCGCCCCGCTAGCGCAATTCATTGAAAATAAATGAGGTGTTTTCTCATTCTCGTTCGGCATGTAGAGAAGGCCGGATTACAGGCCAGCCCGCCGACCCCCGACACGGAGCGAGAGAATGAG                                                                                                                                                <  5:332698/149‑1                                                                    TTTTCTCATTCTCGTTCGGCATGTAGAGAAGGCCGGATTACAGGCCAGCCCGCCGACCCCCGACACGGAGCGAGAGAATGAGAAAACACCTCATTTATTTTCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGA                                                                                           >  7:134533/1‑135                                                                    TTTTCTCATTCTCGTTCGGCATGTAGAGAAGGCCGGATTACAGGCCAGCCCGCCGACCCCCGACACGGAGCGAGAGAATGAGAAAACACCTCATTTATTTTCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGA                                                                                           <  8:134533/135‑1                                                                           ATTCTCGTTCGGCATGTAGAGAAGGCCGGATTACAGGCCAGCCCGCCGACCCCCGACACGGAGCGAGAGAATGAGAAAACACCTCATTTATTTTCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGAGCACCTGTTAATCCAAACGC                                                                       >  7:67957/1‑148                                                                                                                                              AGAATGAGAAAACACCTCATTTATTTTCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGAGCACCTGTTAATCCAAACGCTCTCTCAAACCAAAAAACAAAGGGCACCCATCCTCGGGCGCCCTTTGCCTTACAGCCAGGTGAACTG    >  5:304575/1‑148                                                                                                                                               GAATGAGAAAACACCTCATTTATTATCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGAGCACCTGTTAATCCAAACGCTCTCTCAAACCAAAAAACAAAGGGCACCCATCCTCGGGCGCCCTTTGCCTTACAGCCAGGTGAACTGAA  <  8:67957/149‑1                                                                                                                                                                                                                                                                                                     GTTTGGATTAACAGGTGCTCGCAGGTACCCGCCCCGCTAGCGCAATTCATTGAAAATAAATGAGGTGTTTTCTCATTCTCGTTCGGCATGTAGAGAAGGCCGGATTACAGGCCAGCCCGCCGACCCCCGACACGGAGCGAGAGAATGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5414313‑5414165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagaatgagAAAACACCTCATTTATTTTCAATGAATTGCGCTAGCGGGGCGGGTACCTGCGAGCACCTGTTAATCCAAACGCTCTCTCAAACCAAAAAACAAAGGGCACCCATCCTCGGGCGCCCTTTGCCTTACAGCCAGGTGAACTGAA  >  NC_002947/5414243‑5414384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.