| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5564019 = | 49 (0.870) | 3 (0.060) | 3/246 | NT | 6.0% | coding (228/1302 nt) | hflX | GTPase HflX |
| ? | NC_002947 | 5564079 = | 48 (0.890) | coding (168/1302 nt) | hflX | GTPase HflX | |||||
CGAAGACCCGCAGGAGTTTCAGGAGTTGGCATTGTCGGCCGGTGCCGACATCGTCTCGCTGGTCACGGTGACAAGGCATCAGCCTTCCGCCAAATACCTGATTGGCAGTGGCAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAACAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5564172‑5564019‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtaTTTGGCGGAAGGCTGATGCCTTGTCACCGTGACCAGCGAGACGATGTCGGCACCGGCCGACAATGCCAACTCCTGAAACTCCTGCGGGTCTTCGCGCGCCTCAGGGTTCTGACCTTCCAAGTGAACGAGCAACGCCCGCTCAC > NC_002947/5564079‑5564221 CGAAGACCCGCAGGAGTTTCAGGAGTTGGCATTGTCGGCCGGTGCCGACATCGTCTCGCTGGTCACGGTGACAAGGCATCAGCCTTCCGCCAAATACCTGATTGGCAGTGGCAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAAC < 1:271938/149‑1 AGACCCGCAGGAGTTTCAGGAGTTGGCATTGTCGGCCGGTGCCGACATCGTCTCGCTGGTCACGGTGACAAGGCATCAGCCTTCCGCCAAATACCTGATTGGCAGTGGCAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAACAGG > 3:332254/1‑149 CGCCAAATACCTGATTGGCAGTGGCAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAACAGGTATTTGGCGGAAGGCTGATGCCTTGTCACCGTGACCAGCGAGACGATGTCGGCACCGGCCGACAATGCCAACTCCTGAAACTCC > 2:26104/1‑149 ACCTGATTGGCAGTGGCAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAACAGGTATTTGGCGGAAGGCTGATGCCTTGTCACCGTGACCAGCGAGACGATGTCGGCACCGGCCGACAATGCCAACTCCTGAAACTCCTGCGGGTC > 8:108672/1‑149 CAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAACAGGTATTTGGCGGAAGGCTGATGCCTTGTCACCGTGACCAGCGAGACGATGTCGGCACCGGCCGACAATGCCAACTCCTGAAACTCCTGCGGGTCTTCGCGCGCCTCAGGG < 7:108672/149‑1 CAGGTATTTGGCGGAAGGCTGATGCCTTGTCACCGTGACCAGCGAGACGATGTCGGCACCGGCCGACAATGCCAACTCCTGAAACTCCTGCGGGTCTTCGCGCGCCTCAGGGTTCTGACCTTCCAAGTGAACGAGCAACGCCCGCTCAC < 1:26104/149‑1 CGAAGACCCGCAGGAGTTTCAGGAGTTGGCATTGTCGGCCGGTGCCGACATCGTCTCGCTGGTCACGGTGACAAGGCATCAGCCTTCCGCCAAATACCTGATTGGCAGTGGCAAGGTCGAAGAGCTGCACGACCTGGTCCATGCCGAACAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5564172‑5564019‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtaTTTGGCGGAAGGCTGATGCCTTGTCACCGTGACCAGCGAGACGATGTCGGCACCGGCCGACAATGCCAACTCCTGAAACTCCTGCGGGTCTTCGCGCGCCTCAGGGTTCTGACCTTCCAAGTGAACGAGCAACGCCCGCTCAC > NC_002947/5564079‑5564221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |