New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5601631	44 (0.780)	3 (0.060)	3/238	NT	7.6%	coding (1851/5418 nt)	PP_4924	subtilase family serine protease
	?	NC_002947	= 5601675	32 (0.610)					coding (1807/5418 nt)	PP_4924	subtilase family serine protease

CCAATCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5601479‑5601631 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagtgccAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAGGACATCATCGCCAGCGGCGGT  <  NC_002947/5601675‑5601529                                                                                                                                                                                                                                                                                                              CCAATCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAG                                                                                                                                                         >  4:349456/1‑149   AATCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCGATGCGCGATGGTCAGCTCGGCCTTGGACATGTTCAGCCCACCGCCATGCTCCCCCACGATCAGTG                                                                                                                                                       >  2:134197/1‑149     TCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCC                                                                                                                                                     >  6:159272/1‑149     TCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCC                                                                                                                                                     <  8:20162/149‑1                                                     CGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACAC                                                                                                         <  1:169670/145‑1                                                     CGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACAC                                                                                                         >  2:169670/1‑145                                                          CTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGAT                                                                                                <  6:165559/149‑1                                                                                                                                                 ATCAGTGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAGGACATCATCGCCAG         >  3:119755/1‑149                                                                                                                                                  TCAGTGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAGGACATCATCGCCAGC        >  5:139368/1‑149                                                                                                                                                      TGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAG                       <  3:345754/130‑1                                                                                                                                                      TGCCAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAG                       >  4:345754/1‑130                                                                                                                                                        CCAGCGATGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAGGACATCATCGCCAGCGGCGGT  >  3:349456/1‑149                                                                                                                                                                                                                                                                                                              CCAATCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5601479‑5601631 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagtgccAGCGACGATTGGGCGAACATGCAGGGCAATGGTGGGCGCGACACGGCACTGATCGTGGGGGAGCATGGCGTTGGGCTGAACATGGCCAAGGCCGGGCTGACCATCGCGCAAGGCGGGCGGGGTAAGGACATCATCGCCAGCGGCGGT  <  NC_002947/5601675‑5601529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.