New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 560163144 (0.780)3 (0.060) 3/238 NT 7.6% coding (1851/5418 nt) PP_4924 subtilase family serine protease
?NC_002947 = 5601675 32 (0.610)coding (1807/5418 nt) PP_4924 subtilase family serine protease

TCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGCCAACTGCCCTCTGGGGCCGCGGTCAAGACATCA  >  NC_002947/5601483‑5601778
                                                                                                                                                    |                                                                                                                                                   
tCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCC                                                                                                                                                     <  8:20162‑M1/149‑1 (MQ=255)
tCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCC                                                                                                                                                     >  6:159272‑M1/1‑149 (MQ=255)
     aaGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTc                                                                                                                                                >  4:307187/1‑149 (MQ=255)
        cTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTcgcg                                                                                                                                             <  7:109050/149‑1 (MQ=255)
             gCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCccac                                                                                                                                        >  6:62207/1‑149 (MQ=255)
              cccGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCccac                                                                                                                                        >  1:115211/1‑148 (MQ=255)
               ccGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCccacca                                                                                                                                      >  2:65562/1‑149 (MQ=255)
                        ccTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGc                                                                                                                             <  2:115211/149‑1 (MQ=255)
                         cTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCa                                                                                                                            >  4:238356/1‑149 (MQ=255)
                         cTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCa                                                                                                                            >  4:119755/1‑149 (MQ=255)
                         cTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCa                                                                                                                            <  3:73572/149‑1 (MQ=255)
                         cTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCa                                                                                                                            <  3:307187/149‑1 (MQ=255)
                              tgaAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGTCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTc                                                                                                                       <  7:40846/149‑1 (MQ=255)
                              tgaAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTc                                                                                                                       <  8:97517/149‑1 (MQ=255)
                              tgaAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTc                                                                                                                       >  6:139368/1‑149 (MQ=255)
                               gaAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCg                                                                                                                      >  4:14222/1‑149 (MQ=255)
                                aaaaCTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGc                                                                                                                     <  1:65562/149‑1 (MQ=255)
                                 aaaCTCCGCGTTGACCGCCGCTGGCGATTATGTCCGTACCCCGCACGCCTTGCTCGATTGTCAGCCCTGCCTTGTCCATGTTCAGCCCAACGCCATGCTCCACCACGATCAGTGCCGTGTCTCTCCCACCATTGCCCTGCATGTTAGc                                                                                                                     <  5:342112/148‑1 (MQ=255)
                                  aaCTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGcc                                                                                                                    >  6:306119/1‑148 (MQ=255)
                                        gcgTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGGTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAAtcgt                                                                                                             <  5:326770/149‑1 (MQ=255)
                                              aCCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCa                                                                                                                  <  4:75736/138‑1 (MQ=255)
                                              aCCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCa                                                                                                                  >  3:75736/1‑138 (MQ=255)
                                              aCCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCATCGCTgg                                                                                                       >  3:349456‑M2/1‑147 (MQ=255)
                                                cgccgcTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacac                                                                                                         <  1:169670‑M1/145‑45 (MQ=255)
                                                cgccgcTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacac                                                                                                         >  2:169670‑M1/1‑101 (MQ=255)
                                                    gcTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTggcactga                                                                                                 >  5:139368‑M2/1‑141 (MQ=255)
                                                     cTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacacggcactgat                                                                                                <  6:165559‑M1/149‑54 (MQ=255)
                                                     cTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTggcactgat                                                                                                >  3:119755‑M2/1‑140 (MQ=255)
                                                        gCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCAc                                                                                             <  5:312068/149‑1 (MQ=255)
                                                            tgatgTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAAt                                                                                         <  5:62207/149‑1 (MQ=255)
                                                               tgTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATAc                                                                                       <  3:14222/148‑1 (MQ=255)
                                                                gTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACAt                                                                                     >  7:78276/1‑149 (MQ=255)
                                                                 tCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACAtc                                                                                    <  3:65800/149‑1 (MQ=255)
                                                                   cTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTggca                                                                                                     >  4:345754‑M2/1‑126 (MQ=255)
                                                                   cTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTggca                                                                                                     <  3:345754‑M2/130‑5 (MQ=255)
                                                                      aCCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTATCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACAtcgtcg                                                                                <  6:156041/148‑1 (MQ=255)
                                                                       ccccGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGcc                                                                                                                                 <  4:270651/98‑1 (MQ=255)
                                                                       ccccGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGcc                                                                                                                                 >  3:270651/1‑98 (MQ=255)
                                                                           gcccgccTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTcgcccgcc                                                                          >  2:298078/1‑149 (MQ=255)
                                                                                     cgcgATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGa                                                                 <  5:306119/148‑1 (MQ=255)
                                                                                         aTGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGgt                                                            <  3:238356/149‑1 (MQ=255)
                                                                                            gTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCGCCGTGATAGGTGTtg                                                        <  1:298078/149‑1 (MQ=255)
                                                                                             tCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTtg                                                        <  3:269251/149‑1 (MQ=255)
                                                                                             tCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTtg                                                        >  3:218669/1‑149 (MQ=255)
                                                                                             tCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTtg                                                        <  3:342957/149‑1 (MQ=255)
                                                                                               aGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTtgc                                                       <  8:78276/148‑1 (MQ=255)
                                                                                                   cGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCAACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCAGTGATAACGAATTCATCGTCGCCCGCCCCGCCGTGAGAGGTGTTGCTgcct                                                  >  4:251177/1‑148 (MQ=255)
                                                                                                            ccATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTtg                                                        <  7:329342/134‑1 (MQ=255)
                                                                                                            ccATGTTCAGCCAAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTtg                                                        >  8:329342/1‑134 (MQ=255)
                                                                                                               tGTTCAGCCCAACGCCATTCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTCATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCaccaacc                                      <  7:275354/149‑1 (MQ=255)
                                                                                                               tGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCATGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCaccaacc                                      <  5:159272/149‑1 (MQ=255)
                                                                                                                    aGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGcc                                  >  7:3184/1‑148 (MQ=255)
                                                                                                                                     ccccACGATCAGTGCCGTGTCGCGCCCACCATTGCCCCGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGCCAACTGCCCTCTGGGGCcg                >  3:97537/1‑149 (MQ=255)
                                                                                                                                       ccACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGCCAACTGCCCTCTGGGGCcgcg              >  7:29968/1‑149 (MQ=255)
                                                                                                                                       ccACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGCCAACTGCCCTCTGGGGCcgcg              <  8:3184/149‑1 (MQ=255)
                                                                                                                                            aTCAGTGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacacggcactgatcgtgggggagcatggcgttgggctgaacatggccaaggccgggctgaccatcgcgcaaggcgggcggggtaaggacatcatcgccag         >  3:119755‑M1/1‑9 (MQ=255)
                                                                                                                                            aTCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTggcactgatcgtgggggagcatggcgttgggctgaacatggccaaggccgggctgaccatcgcgcaaggcgggcggggtaaggacatcatcgccag         <  6:165559‑M2/149‑97 (MQ=255)
                                                                                                                                             tCAGTGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacacggcactgatcgtgggggagcatggcgttgggctgaacatggccaaggccgggctgaccatcgcgcaaggcgggcggggtaaggacatcatcgccagc        >  5:139368‑M1/1‑8 (MQ=255)
                                                                                                                                                 tGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacacggcactgatcgtgggggagcatggcgttgggctgaacatggccaaggccgggctgaccatcgcgcaaggcgggcggggtaag                       <  3:345754‑M1/130‑127 (MQ=255)
                                                                                                                                                 tGCCagcgacgattgggcgaacatgcagggcaatggtgggcgcgacacggcactgatcgtgggggagcatggcgttgggctgaacatggccaaggccgggctgaccatcgcgcaaggcgggcggggtaag                       >  4:345754‑M1/1‑4 (MQ=255)
                                                                                                                                                 tGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGCCAACTGCCCTCTGGGGCCGCGGTCAAGAca     >  1:128350/1‑148 (MQ=255)
                                                                                                                                                   ccagcgatgattgggcgaacatgcagggcaatggtgggcgcgacacggcactgatcgtgggggagcatggcgttgggctgaacatggccaaggccgggctgaccatcgcgcaaggcgggcggggtaaggacatcatcgccagcggcggt  >  3:349456‑M1/1‑2 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCAGCAAGCTGTCGCCCGAGCCGCCCTTGATGAAAACTCCGCGTTGACCGCCGCTGGCGATGATGTCCTTACCCCGCCCGCCTTGCGCGATGGTCAGCCCGGCCTTGGCCATGTTCAGCCCAACGCCATGCTCCCCCACGATCAGTGCCGTGTCGCGCCCACCATTGCCCTGCATGTTCGCCCAATCGTCGCTGGCACTGATCACGAATACATCGTCGCCCGCCCCGCCGTGATAGGTGTTGCTGCCACCGCCACCAACCAGCCAACTGCCCTCTGGGGCCGCGGTCAAGACATCA  >  NC_002947/5601483‑5601778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.