| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5685154 = | 59 (1.040) | 3 (0.060) | 3/246 | NT | 5.3% | coding (1739/4941 nt) | PP_4988 | signal transduction histidine kinase CheA/CheY‑like receiver |
| ? | NC_002947 | 5685206 = | 50 (0.930) | coding (1687/4941 nt) | PP_4988 | signal transduction histidine kinase CheA/CheY‑like receiver | |||||
ACCTGCCTGACCTGCTGGCCGACTTTGCCGCCGGCCAGTTGCCGCAACTGACTGAAATCGAGCAATTGGCCGGGCATCTGCACAGCCTGGCCGAAAACGATGCCCCGGCGGCTGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5685304‑5685154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcatCGTTTTCGGCCAGGCTGTGCAGATGCCCGGCCAATTGCTCGATTTCAGTCAGTTGCGGCAACTGGCCGGCGGCAAAGTCGGCCAGCAGGTCAGGCAGGTGAACGAACACCTGCTGCAGCGCTACAACCCCTTCCGGACTGAGC > NC_002947/5685206‑5685348 ACCTGCCTGACCTGCTGGCCGACTTTGCCGCCGGCCAGTTGCCGCAACTGACTGAAATCGAGCAATTGGCCGGGCATCTGCACAGCCTGGCCGAAAACGATGCCCCGGCGGCTGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGG > 2:44460/1‑148 AACGATGCCCCGGCGGCTGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGGCATCGTTTTCGGCCAGGCTGTGCAGATGCCCGGCCAATTGCTCGATTTCAGTCAGTTGCGGCAACTGGCCGGCGGCAAAGTCGGCCAGCAGGTCAG > 5:3280/1‑149 GATGCCCCGGCGGCTGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGGCATCGTTTTCGGCCAGGCTGTGCAGATGCCCGGCCAATTGCTCGATTTCAGTCAGTTGCGGCAACTGGCCGGCGGCAAAGTCG > 1:166558/1‑133 GATGCCCCGGCGGCTGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGGCATCGTTTTCGGCCAGGCTGTGCAGATGCCCGGCCAATTGCTCGATTTCAGTCAGTTGCGGCAACTGGCCGGCGGCAAAGTCG < 2:166558/133‑1 GGGCATCGTTTTCGGCCAGGCTGTGCAGATGCCCGGCCAATTGCTCGATTTCAGTCAGTTGCGGCAACTGGCCGGCGGCAAAGTCGGCCAGCAGGTCAGGCAGGTGAACGAACACCTGCTGCAGCGCTACAACCCCTTCCGGACTGAGC < 5:363438/149‑1 ACCTGCCTGACCTGCTGGCCGACTTTGCCGCCGGCCAGTTGCCGCAACTGACTGAAATCGAGCAATTGGCCGGGCATCTGCACAGCCTGGCCGAAAACGATGCCCCGGCGGCTGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5685304‑5685154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcatCGTTTTCGGCCAGGCTGTGCAGATGCCCGGCCAATTGCTCGATTTCAGTCAGTTGCGGCAACTGGCCGGCGGCAAAGTCGGCCAGCAGGTCAGGCAGGTGAACGAACACCTGCTGCAGCGCTACAACCCCTTCCGGACTGAGC > NC_002947/5685206‑5685348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |