| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6133582 = | 51 (0.900) | 3 (0.060) | 3/248 | NT | 5.6% | coding (271/2010 nt) | copA‑II | copper resistance protein A |
| ? | NC_002947 | 6133624 = | 53 (0.980) | coding (229/2010 nt) | copA‑II | copper resistance protein A | |||||
TTCTGACAGGCACCGATTTTGATCTCTACATCGGTGAGTTGCCGGTCAACATTACCGGCACTGTACGTACAGCGATGGCAATCAACGGCTCCATTCCCGGGCCCATCCT‑GCGCTGGCGCGAGGGCGATACCGTCACGCTGCGTGTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6133731‑6133582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaGGATGGGCCCGGGAATGGAGCCGTTGATTGCCATCGCTGTACGTACAGTGCCGGTAATGTTGACCGGCAACTCACCGATGTAGAGATCAAAATCGGTGCCTGTCAGAACATTCGGTTGGCCAGGGCTGGTCACAGCCCAGACCGGC > NC_002947/6133624‑6133769 TTCTGACAGGCACCGATTTTGATCTCTACATCGGTGAGTTGCCGGTCAACATTACCGGCACTGTACGTACAGCGATGGCAATCAACGGCTCCATTCCCGGGCCCATCCT‑GCGCTGGCGCGAGGGCGATACCGTCACGCTGCGTGTGCG > 1:130927/1‑148TTCTGACAGGCACCGATTTTAATCTCTACATCGGTGAGTTGCCGGTCAACATTACCGGCACTGTACGTACAGCGATGGCAATCAACGGCTCCATTCCCGGGCCCATCCTAACGCTTGCCCGAGGGCGATACCGTAACGATGCGTGTGC > 1:119705/1‑148 ATCCT‑GCGCTGGCGCGAGGGCGATACCGTCACGCTGCGTGTGCGCAGGATGGGCCCGGGAATGGAGCCGTTGATTGCCATCGCTGTACGTACAGTGCCGGTAATGTTGACCGGCAACTCACCGATGTAGAGATCAAAATCTGTGCCTGT > 3:264070/1‑149 CT‑GCGCTGGCGCGAGGGCGATACCGTCACGCTGCGTGTGCGCAGGATGGGCCCGGGAATGGAGCCGTTGATTGCCATCGCTGTACGTACAGTGCCGGTAATGTTGACCGGCAACTCACCGATGTAGAGATCAAAATCGGTGCCTGT > 6:91042/1‑146 GCGCGAGGGCGATACCGTCACGCTGCGTGTGCGCAGGATGGGCCCGGGAATGGAGCCGTTGATTGCCATCGCTGTACGTACAGTGCCGGTAATGTTGACCGGCAACTCACCGATGTAGAGATCAAAATCGGTGCCTGTCAGAACATTC < 5:91042/148‑1 GCAGGATGGGCCCGGGAATGGAGCCGTTGATTGCCATCGCTGTACGTACAGTGCCGGTAATGTTGACCGGCAACTCACCGATGTAGAGATCAAAATCGGTGCCTGTCAGAACATTCGGTTGGCCAGGGCTGGTCACAGCCCAGACCGGC > 2:73267/1‑149 TTCTGACAGGCACCGATTTTGATCTCTACATCGGTGAGTTGCCGGTCAACATTACCGGCACTGTACGTACAGCGATGGCAATCAACGGCTCCATTCCCGGGCCCATCCT‑GCGCTGGCGCGAGGGCGATACCGTCACGCTGCGTGTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6133731‑6133582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaGGATGGGCCCGGGAATGGAGCCGTTGATTGCCATCGCTGTACGTACAGTGCCGGTAATGTTGACCGGCAACTCACCGATGTAGAGATCAAAATCGGTGCCTGTCAGAACATTCGGTTGGCCAGGGCTGGTCACAGCCCAGACCGGC > NC_002947/6133624‑6133769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |