New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 99850	45 (0.800)	3 (0.060)	3/244	NT	6.8%	coding (559/651 nt)	PP_0094	5'‑nucleotidase
	?	NC_002947	= 99924	40 (0.750)					coding (485/651 nt)	PP_0094	5'‑nucleotidase

AGGTGGGAGGGCCGGTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAATCAGCTCGACCTTGTTGGTGCG  >  NC_002947/99720‑99991                                                                                                                                   |                                                                                                                                               aGGTGGGAGGGCCGGTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGc                                                                                                                             <  8:333670/149‑1 (MQ=255)   gTGGGAGGGCCGGTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGATAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCg                                                                                                                                               <  8:164531/130‑1 (MQ=255)   gTGGGAGGGCCGGTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCg                                                                                                                                               >  7:164531/1‑130 (MQ=255)             cGGTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGtt                                                                                                                 >  5:101294/1‑149 (MQ=255)              ggTTGCAAAGCAGCCCTGCTGGCGCTCAAGCGGTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGAAGCCCGTtg                                                                                                                >  3:258178/1‑149 (MQ=255)               gTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGAAGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTtgc                                                                                                               >  4:58461/1‑149 (MQ=255)                ttGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCAACGGGCTGCAGGCCGTcgcg                                                                                                              <  2:325383/149‑2 (MQ=255)                   cAAAGCAGCCCTGCTGGCGATCAAGCGTGGAGAAAAGCGTGATGCATATCGGCTCCCGGGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTACCGGCTCCCAAACCCGTCCCCCACC‑GCGACGGCCTGc                                                                                                                         >  5:89079/1‑135 (MQ=255)                    aaaGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCtgatgatcggggaccgcaagcatgacctgatcggcgc                                                                                                           >  6:348843‑M1/1‑112 (MQ=255)                    aaaGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTgcgc                                                                                                          <  1:327034/149‑1 (MQ=255)                    aaaGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTgcgc                                                                                                          >  7:108907/1‑149 (MQ=255)                        cagcCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTgcgcgcgc                                                                                                      >  4:222482/1‑149 (MQ=255)                           cccTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAACCCCGTACCCCACC‑GCGCCGGCCTGCAGCCCGTTGCTGCGCGCGCCGa                                                                                                   >  5:330554/1‑149 (MQ=255)                           cccTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCg                                                                                                    >  1:307524/1‑148 (MQ=255)                           cccTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGa                                                                                                   >  5:4962/1‑149 (MQ=255)                               gctgGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCGATCAGCTCTTCCCGGCTCCCACACCCGTCCCCCACC‑GCGACGGCCTGCAGCCCGTAGCTGCGCGCGCCGATCAg                                                                                               >  7:129757/1‑149 (MQ=255)                                 tgGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGt                                                                                                                                              >  3:40524/1‑101 (MQ=255)                                 tgGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGt                                                                                                                                              <  4:40524/101‑1 (MQ=255)                                   gcgcTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGt                                                                                             <  2:307524/147‑1 (MQ=255)                                           gCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCg                                                                                   >  1:330545/1‑149 (MQ=255)                                            ccTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGt                                                                                                                  <  5:304082/117‑1 (MQ=255)                                            ccTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGt                                                                                                                  >  6:304082/1‑117 (MQ=255)                                               tGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTcc                                                                               >  2:211454/1‑149 (MQ=255)                                               tGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTcc                                                                               >  4:167512/1‑149 (MQ=255)                                                      aGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGatca                                                                        <  4:318000/149‑1 (MQ=255)                                                         cTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGAtcatca                                                                     <  2:156483/149‑1 (MQ=255)                                                           gATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTa                                                                                                                                             >  7:265415/1‑76 (MQ=255)                                                           gATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTa                                                                                                                                             <  8:265415/76‑1 (MQ=255)                                                            aTGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTg                                                                                     <  6:352391/130‑1 (MQ=255)                                                            aTGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTg                                                                                     >  5:352391/1‑130 (MQ=255)                                                                aaaTCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAgggtttg                                                              <  4:61105‑M2/149‑8 (MQ=255)                                                                 aaTCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCtgatgatcggggaccgcaagcatgacctgatcggcgcgcgcagcaacgggctgcaggccgtcgcggtggggtacgggtttgg                                                              <  5:348843‑M1/149‑83 (MQ=255)                                                                 aaTCGGCTACCGTGGCGAAGTGGAAAGCGGATTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTgc                                                             >  7:9651/1‑149 (MQ=255)                                                                  aTCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTgcg                                                            >  3:200328/1‑149 (MQ=255)                                                                      gCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCgg                                                        <  4:200328/149‑1 (MQ=255)                                                                       cTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCtgatgatcggggaccgcaagcatgacctgatcggcgcgcgcagcaacgggctgcaggccgtcgcggtggggtacgggtttgggagccg                                                        <  7:29313‑M1/149‑89 (MQ=255)                                                                         aCCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTc                                                     >  2:218607/1‑149 (MQ=255)                                                                          ccGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGt                                                      <  2:330545/147‑1 (MQ=255)                                                                               gCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGccc                                               <  6:4962/149‑1 (MQ=255)                                                                                 gAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCct                                              >  8:36190/1‑148 (MQ=255)                                                                                    gTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCcttctt                                          <  1:47734/149‑1 (MQ=255)                                                                                     tGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCttcttc                                         <  3:61105/149‑1 (MQ=255)                                                                                         aaGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATcc                                     <  3:222482/149‑1 (MQ=255)                                                                                                  cttctGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCaaa                               <  7:90635/146‑1 (MQ=255)                                                                                                  cttctGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCaaa                               >  8:90635/1‑146 (MQ=255)                                                                                                      tGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGt                                                      <  6:232100/119‑1 (MQ=255)                                                                                                      tGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGt                                                      >  5:232100/1‑119 (MQ=255)                                                                                                       gCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACCTGCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATc                                                                                                 <  1:59484/76‑1 (MQ=255)                                                                                                       gCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATc                                                                                                 >  2:59484/1‑75 (MQ=255)                                                                                                        ccATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAAt                       <  7:36190/148‑1 (MQ=255)                                                                                                        ccATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAATc                      <  6:101294/149‑1 (MQ=255)                                                                                                                tctTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCTGATCATCAGGGTTTGCGCCGGGACCAGCCCTTCTTCATCCAGCAAATGGCGAATCAGCTCGa               >  6:30424/1‑148 (MQ=255)                                                                                                                    cccGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGTGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAATCAGCTCGAcc             <  1:211454/146‑1 (MQ=255)                                                                                                                      cGGCTCCCAAACCCGTACCCCCCC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCTGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAATCAGCTCGACCttgtt        >  6:301701/1‑149 (MQ=255)                                                                                                                      cGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAgggtttgggagccgggaagagctgatggcagaagaacccgctttccacttcgccacggtag        <  7:29313‑M2/149‑62 (MQ=255)                                                                                                                       ggCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAATCAGCTCGACCttgttg       <  8:9651/149‑1 (MQ=255)                                                                                                                            ccAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAgggtttgggagccgggaagagctgatggcagaagaacccgctttccacttcgccacggtagccgatt  <  5:348843‑M2/149‑68 (MQ=255)                                                                                                                             cAAACCCtgatgatcggggaccgcaagcatgacctgatcggcgcgcgcagcaacgggctgcaggccgtcgcggtggggtacgggtttgggagccgggaagagctgatggcagaagaacccgctttccacttcgccacggtagccgattt  <  4:61105‑M1/149‑143 (MQ=255)                                                                                                                                   ctgatgatcggggaccacaagcatgacctgatcggcgc                                                                                                           <  6:287008‑M1/38‑38 (MQ=255)                                                                                                                                   ctgatgatcggggaccacaagcatgacctgatcggcgc                                                                                                           >  5:287008‑M1/1‑1 (MQ=255)                                                                                                                                   |                                                                                                                                               AGGTGGGAGGGCCGGTTGCAAAGCAGCCCTGCTGGCGCTCAAGCCTTGATAAAAGCCTGATGCAAATCGGCTACCGTGGCGAAGTGGAAAGCGGGTTCTTCTGCCATCAGCTCTTCCCGGCTCCCAAACCCGTACCCCACC‑GCGACGGCCTGCAGCCCGTTGCTGCGCGCGCCGATCAGGTCATGCTTGCGGTCCCCGATCATCAGGGTTTGCGCCGGGTCCAGCCCTTCTTCATCCAGCAAATGGCGAATCAGCTCGACCTTGTTGGTGCG  >  NC_002947/99720‑99991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.