New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1494006 =	39 (0.690)	4 (0.070)	4/246	NT	10.4%	coding (865/2277 nt)	PP_1306	Pyocin S‑type killer domain‑containing protein
	?	NC_002947	1494037 =	32 (0.590)					coding (834/2277 nt)	PP_1306	Pyocin S‑type killer domain‑containing protein

GCGCCAGTGCCAGGTGGTATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTAAACAATCGAAATGTATTTGTCGCTCT  >  NC_002947/1493859‑1494148                                                                                                                                                    |                                                                                                                                               caggtgattgcgcgtagaacagcgcagatccacacagagcgacaaatacatttcgattgtttacccaacgtccttcagcatgagctgggtcaaaccgtcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaa                                                                                                                                                >  3:248309‑M1/148‑148 (MQ=255)  aggtgattgcgcgtagaacagcgcagatccacacagagcgacaaatacatttcgattgtttacccaacgtccttcagcatgagctgggtcaaaccgtcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaACt                                                                                                                                              <  2:270447‑M1/3‑1 (MQ=255)  aggtgattgcgcgtagaacagcgcagatccacacagagcgacaaatacatttcgattgtttacccaacgtccttcagcatgagctgggtcaaaccgtcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaACt                                                                                                                                              <  2:33197‑M1/3‑1 (MQ=255)    ccAGTGCCAGGTGGTATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGc                                                                                                                                            <  2:136163/149‑1 (MQ=255)       gTGCCAGGTGGTATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTg                                                                                                                                         <  7:207080/149‑1 (MQ=255)          ccAGGTGGTATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGc                                                                                                                                       <  3:146589/148‑1 (MQ=255)                ggtATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCAc                                                                                                                                 >  5:50895/1‑148 (MQ=255)                 gtATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCAcc                                                                                                                                >  5:188308/1‑148 (MQ=255)                      ccTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTGTTGATCTTGATAGGGGGCAATTTGCGACTGCTTGGCCTGCACCAAggc                                                                                                                           <  5:94008/148‑1 (MQ=255)                        tGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAggc                                                                                                                           >  1:297202/1‑146 (MQ=255)                        tGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAggc                                                                                                                           <  2:297202/146‑1 (MQ=255)                            aGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGCAATTTGCGACTGCTTGGCCTGCACCAAGGCGgcagca                                                                                                                    <  1:2147/149‑1 (MQ=255)                               gagtgCCAGCCCGCCGCAACCGTGGCCCCTCTACAACGGTCAAAACCCCTCCAAGTGGGGGCTTCGACAGGGGGCTGTTGATGCCCGGGTTTTGATCTTTATACGGGCGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGcagcag                                                                                                                   <  4:81292/143‑1 (MQ=255)                                   gCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGc                                                                                                               >  4:47647/1‑147 (MQ=255)                                       gCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCaggta                                                                                                         <  2:178790/149‑1 (MQ=255)                                        cccGGCGCAACCGTTGCTCATCTACAAGGAGCAAAAGCCCTTCACGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCaggtag                                                                                                        <  6:6304/149‑1 (MQ=255)                                                  ccGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAgg                                                                                              <  2:96455/149‑1 (MQ=255)                                                         tCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGa                                                                                        >  5:236744/1‑148 (MQ=255)                                                           aTCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGAc                                                                                       >  7:196937/1‑147 (MQ=255)                                                               aCAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAagcgt                                                                                 <  4:340560/149‑1 (MQ=255)                                                                cAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCa                                                                                                                                  >  4:164063/1‑99 (MQ=255)                                                                cAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCa                                                                                                                                  <  3:164063/99‑1 (MQ=255)                                                                cAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAggcggc                                                                                                                        >  8:26198/1‑109 (MQ=255)                                                                cAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAggcggc                                                                                                                        <  7:26198/109‑1 (MQ=255)                                                                cAAGGTGCAAAAGCACTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCCCGCGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAagagt                                                                                 >  8:71534/1‑148 (MQ=255)                                                                   gggtcAACAGCCCTTCAAGTTGTGGTTTCTACAGGGGGCTGTGGATGCGCGGGTTTTGATCTTGATAGGGCGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAagcgtgagc                                                                             <  4:140633/145‑1 (MQ=255)                                                                   ggTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAagcgtgagc                                                                             <  3:47647/149‑1 (MQ=255)                                                                      gCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGttt                                                                                           <  8:40431/132‑1 (MQ=255)                                                                      gCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGttt                                                                                           >  7:40431/1‑132 (MQ=255)                                                                         cttcagcatgagctgggtcaaaccgtcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaACTGCTTGGCCTGCACCAAGGCGgcag                                                                                                                      >  4:229902‑M1/76‑102 (MQ=255)                                                                         cttcagcatgagctgggtcaaaccgtcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaACTGCTTGGCCTGCACCAAGGCGgcag                                                                                                                      <  3:229902‑M1/27‑1 (MQ=255)                                                                              ccTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAagcgtgagcgtg                                                                          <  5:7788/141‑1 (MQ=255)                                                                              ccTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAagcgtgagcgtg                                                                          >  6:7788/1‑141 (MQ=255)                                                                                         tgGGTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGa                                                        <  6:188308/148‑1 (MQ=255)                                                                                           gTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGAcc                                                      <  5:37811/148‑1 (MQ=255)                                                                                                  tcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGcc                                                                                                              <  7:71667‑M1/35‑1 (MQ=255)                                                                                                  tcattgacgacacgctcacgcttgtccaaaccttcagtacctacctggcaACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGcc                                                                                                              >  8:71667‑M1/51‑85 (MQ=255)                                                                                                    gggggCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGc                                            <  6:236744/149‑1 (MQ=255)                                                                                                      gggCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTg                                          <  1:247015/149‑1 (MQ=255)                                                                                                            ttGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGAc                                    >  8:130539/1‑149 (MQ=255)                                                                                                               aTGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGtt                                 <  8:196937/149‑1 (MQ=255)                                                                                                                   gcgGGTTTTGATCTTGATAGGGGGGAATTTACGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTggg                              >  1:33197/1‑148 (MQ=255)                                                                                                                       gTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGTCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTaaa                          >  1:270447/1‑148 (MQ=255)                                                                                                                                ttGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTAAACAATCGAAAt                >  3:299714/1‑149 (MQ=255)                                                                                                                                  gATAGGGGGCAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTAAACAATCGAAAt                <  1:110764/147‑1 (MQ=255)                                                                                                                                              tttGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTAAACAATCGAAATGTATTTGTCGctct  >  6:271007/1‑149 (MQ=255)                                                                                                                                              tttGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTAAACAATCGAAATGTATTTGTCGctct  >  2:217100/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                               GCGCCAGTGCCAGGTGGTATTCCTGCCAGCGTGGGCCAGCCCGGCGCAACCGTTGCTCATCTACAAGGTGCAAAAGCCCTTCAAGTTGTGGTTTCGACAGGGGGCTGTTGATGCGCGGGTTTTGATCTTGATAGGGGGGAATTTGCGACTGCTTGGCCTGCACCAAGGCGGCAGCAGTTGCCAGGTAGGTACTGAAGGTTTGGACAAGCGTGAGCGTGTCGTCAATGACGGTTTGACCCAGCTCATGCTGAAGGACGTTGGGTAAACAATCGAAATGTATTTGTCGCTCT  >  NC_002947/1493859‑1494148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.