New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2114101	35 (0.620)	3 (0.060)	3/244	NT	7.8%	coding (185/4899 nt)	PP_1882	membrane protein
	?	NC_002947	= 2114117	38 (0.710)					coding (169/4899 nt)	PP_1882	membrane protein

TGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATG  >  NC_002947/2113960‑2114244                                                                                                                                              |                                                                                                                                                 tGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGaatcaat                                                                                                                                           <  5:336239/149‑1 (MQ=255)   cgcCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAatcaatca                                                                                                                                         <  6:46033/149‑1 (MQ=255)      cAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCAGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCTGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCatat                                                                                                                                      <  5:347759/149‑1 (MQ=255)               ttCCTGCATTTGCGAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggt                                                                                                                             >  8:87009‑M2/1‑144 (MQ=255)                   tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggttg                                                                                                                           <  1:330419‑M2/147‑8 (MQ=255)                   tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCG‑CCCCAACCCGAATCAATCATATTGAGCGGGTTGAAg                                                                                                                        >  5:173583/1‑149 (MQ=255)                    gCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAg                                                                                                                        >  5:300565/1‑149 (MQ=255)                       tttGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGtt                                                                                                                      >  7:119500/1‑148 (MQ=255)                           cAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGC‑TCAATATGATTGATtcgggttgggggcgggga                                                                                                                >  2:80606‑M2/1‑131 (MQ=255)                                 tGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCt                                                                                                           <  8:296865/149‑1 (MQ=255)                                       cGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGctcaatatgattgattcgggttgggg                                                                                                                        >  7:310338‑M1/1‑104 (MQ=255)                                       cGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGctcaatatgattgattcgggttgggg                                                                                                                        <  8:310338‑M1/130‑27 (MQ=255)                                       cGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCt                                                                                                     >  6:319704/1‑149 (MQ=255)                                           cTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCggg                                                                                                 <  5:319704/149‑1 (MQ=255)                                                ggTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCgg                                                                                            <  6:300565/149‑1 (MQ=255)                                                 gTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCg                                                                                             >  4:170830/1‑147 (MQ=255)                                                  tCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGg‑ag                                                                                         <  2:330419/149‑1 (MQ=255)                                                    aCTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGaa                                                                                       <  7:128806/149‑1 (MQ=255)                                                          aaTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAAtt                                                                                 >  5:77401/1‑149 (MQ=255)                                                          aaTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAAt                                                                                  <  7:277498/148‑1 (MQ=255)                                                            tGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTgg                                                                               >  2:21837/1‑149 (MQ=255)                                                                  aCCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGccc                                                                          >  6:292773/1‑148 (MQ=255)                                                                         tACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGg‑aga                                                                                        <  3:187248/127‑1 (MQ=255)                                                                         tACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGg‑aga                                                                                        >  4:187248/1‑127 (MQ=255)                                                                          aCGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCggg                                                                  >  5:262747/1‑148 (MQ=255)                                                                             tGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGCAGAAGTAATTGGCGCCCAACTCGGGAAg                                                               <  1:21837/149‑1 (MQ=255)                                                                                   tGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATg                                                        <  5:292773/149‑1 (MQ=255)                                                                                        tgtgTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGaatca                                                                                                                                             <  5:42577/60‑1 (MQ=255)                                                                                        tgtgTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGaatca                                                                                                                                             >  6:42577/1‑60 (MQ=255)                                                                                                             gTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGc                               >  1:199827/1‑148 (MQ=255)                                                                                                                aGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTAt                            <  3:170830/148‑1 (MQ=255)                                                                                                                aGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATc                           >  6:151779/1‑149 (MQ=255)                                                                                                                 gTGACAGATTCCATCCCCGCCCCCAACCCGAATGAATCATATTGAGCGGGGTGAACTTCAGCCTGAGCTCAAGCACGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGCGAAGTTAGATGGACAGTGGGTGTTGTCGGGTGCGGCTGTCg                          >  8:198710/1‑149 (MQ=255)                                                                                                                    aCAGATTCCATCCCCGCCCCCAGCCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGAGGGACAGTGTGTATTGTCCGGTGCGGCTATCGaca                       >  7:227226/1‑149 (MQ=255)                                                                                                                      aGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACAcc                     >  7:85168/1‑149 (MQ=255)                                                                                                                        aTTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGaccacga                   >  6:202563/1‑144 (MQ=255)                                                                                                                           ccATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctct                >  7:105520/1‑149 (MQ=255)                                                                                                                           ccATCCCCG‑CCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctct                <  6:173583/148‑1 (MQ=255)                                                                                                                             aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa                                                          <  3:217425/105‑1 (MQ=255)                                                                                                                             aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa                                                          >  4:217425/1‑105 (MQ=255)                                                                                                                              tCCCCGCCCCCAACCCGaatcaatcatattgagcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttg              >  2:80606‑M1/1‑17 (MQ=255)                                                                                                                                cccGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCAt            >  6:185987/1‑148 (MQ=255)                                                                                                                                     ccccAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcg                          >  7:310338‑M2/1‑26 (MQ=255)                                                                                                                                     ccccAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcg                          <  8:310338‑M2/130‑105 (MQ=255)                                                                                                                                     ccccAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAAc       >  4:344805/1‑148 (MQ=255)                                                                                                                                        cAACCCGctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgcttgcaaatgca      <  1:330419‑M1/147‑141 (MQ=255)                                                                                                                                          aCCCGctcaatatgattgattcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcgggctcacgctcgcaaatgcaggaa  >  8:87009‑M1/1‑5 (MQ=255)                                                                                                                                              |                                                                                                                                                 TGCGCCAGCCGTTGTTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATG  >  NC_002947/2113960‑2114244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.