| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2114101 | 35 (0.620) | 3 (0.060) | 3/244 | NT | 7.8% | coding (185/4899 nt) | PP_1882 | membrane protein |
| ? | NC_002947 | = 2114117 | 38 (0.710) | coding (169/4899 nt) | PP_1882 | membrane protein | |||||
TTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGA > NC_002947/2113974‑2114261 | ttCCTGCATTTGCGAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggt > 8:87009‑M2/1‑144 (MQ=255) tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGcgggttg < 1:330419‑M2/147‑8 (MQ=255) tGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCG‑CCCCAACCCGAATCAATCATATTGAGCGGGTTGAAg > 5:173583/1‑149 (MQ=255) gCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAg > 5:300565/1‑149 (MQ=255) tttGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGtt > 7:119500/1‑148 (MQ=255) cAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGC‑TCAATATGATTGATtcgggttgggggcgggga > 2:80606‑M2/1‑131 (MQ=255) tGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCt < 8:296865/149‑1 (MQ=255) cGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCt > 6:319704/1‑149 (MQ=255) cTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCggg < 5:319704/149‑1 (MQ=255) ggTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCgg < 6:300565/149‑1 (MQ=255) gTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCg > 4:170830/1‑147 (MQ=255) tCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGg‑ag < 2:330419/149‑1 (MQ=255) aCTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGaa < 7:128806/149‑1 (MQ=255) aaTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAAtt > 5:77401/1‑149 (MQ=255) aaTGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAAt < 7:277498/148‑1 (MQ=255) tGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTgg > 2:21837/1‑149 (MQ=255) aCCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGccc > 6:292773/1‑148 (MQ=255) tACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGg‑aga < 3:187248/127‑1 (MQ=255) tACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGg‑aga > 4:187248/1‑127 (MQ=255) aCGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCggg > 5:262747/1‑148 (MQ=255) tGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGGCAGAAGTAATTGGCGCCCAACTCGGGAAg < 1:21837/149‑1 (MQ=255) tGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATg < 5:292773/149‑1 (MQ=255) gTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGc > 1:199827/1‑148 (MQ=255) aGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTAt < 3:170830/148‑1 (MQ=255) aGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATc > 6:151779/1‑149 (MQ=255) gTGACAGATTCCATCCCCGCCCCCAACCCGAATGAATCATATTGAGCGGGGTGAACTTCAGCCTGAGCTCAAGCACGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGCGAAGTTAGATGGACAGTGGGTGTTGTCGGGTGCGGCTGTCg > 8:198710/1‑149 (MQ=255) aCAGATTCCATCCCCGCCCCCAGCCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGAGGGACAGTGTGTATTGTCCGGTGCGGCTATCGaca > 7:227226/1‑149 (MQ=255) aGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACAcc > 7:85168/1‑149 (MQ=255) aTTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGaccacga > 6:202563/1‑144 (MQ=255) ccATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctct > 7:105520/1‑149 (MQ=255) ccATCCCCG‑CCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGctct < 6:173583/148‑1 (MQ=255) aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa < 3:217425/105‑1 (MQ=255) aTCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGa > 4:217425/1‑105 (MQ=255) cccGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCAt > 6:185987/1‑148 (MQ=255) ccccAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcg < 8:310338‑M2/130‑105 (MQ=255) ccccAACCCGAATCAATCATATTGAGcgggttgggggcggggatggaatctgtcactgacgcagttcgcaccgcatacacaggtcataaccacgtacagcggtgaatcattcaaagtgaccggtagttcg > 7:310338‑M2/1‑26 (MQ=255) ccccAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAAc > 4:344805/1‑148 (MQ=255) aatcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTAtt < 6:111240/98‑1 (MQ=255) aatcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTAtt > 5:111240/1‑98 (MQ=255) aatcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGGCACCGCTCTCCATGAAACTCATGAAGTTAAgg < 2:199827/148‑1 (MQ=255) aatcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAggg < 6:77401/149‑1 (MQ=255) tcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGacac < 3:176931/117‑1 (MQ=255) tcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGacac > 4:176931/1‑117 (MQ=255) tcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAg > 3:343150/1‑145 (MQ=255) tcaTATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAg < 4:343150/145‑1 (MQ=255) atatTGAGAGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGTGGACGG‑AGAAGTAATTTGCGCCAAAATCGGGAACTTTGATGGACAGTGTGTATTGTACGGTGCGGCTATCGACACCGATCTCAATGAAACTCATGAAGTTAAGGGCGtt > 7:259096/1‑149 (MQ=255) ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGc < 2:154368/103‑1 (MQ=255) ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGc > 1:154368/1‑103 (MQ=255) ttGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGa < 3:344805/149‑1 (MQ=255) gAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACa > 1:233445/1‑80 (MQ=255) gAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACa < 2:233445/80‑1 (MQ=255) | TTCCTGCATTTGCAAGCGTGAGCCCGAACTACCGGTCACTTTGAATGATTCACCGCTGTACGTGGTTATGACCTGTGTATGCGGTGCGAACTGCGTCAGTGACAGATTCCATCCCCGCCCCCAACCCGAATCAATCATATTGAGCGGGTTGAAGTTCAGGCTGAGCTCAAGCTCGGGGCCGG‑AGAAGTAATTGGCGCCCAACTCGGGAAGTTTGATGGACAGTGTGTATTGTCCGGTGCGGCTATCGACACCGCTCTCCATGAAACTCATGAAGTTAAGGGCGTTGGA > NC_002947/2113974‑2114261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |