New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2403799 =	54 (0.960)	4 (0.080)	4/238	NT	7.2%	coding (426/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2403860 =	54 (1.040)					coding (487/1209 nt)	PP_2106	ammonium transporter

GGTCAAGTGTTTCTTCCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCG  >  NC_002947/2403652‑2403945                                                                                                                                                    |                                                                                                                                                   gcccagcgccagaaagggaatgctcgatggcgcaaaagccaccaaacgcccatcgcggtaccgcccacggcgcgggcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGt                                                                                                                                                   >  7:251809‑M1/148‑149 (MQ=255)  gTCAAGTGTTTCTTCCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGgtgtggtgtg                                                                                                                                                  >  3:2646/1‑149 (MQ=255)  cccagcgccagaaagggaatgctcgatggcgcaaaagccaccaaacgcccatcgcggtaccgcccacggcgcgcgcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGTg                                                                                                                                                  <  2:165011‑M1/3‑1 (MQ=255)   tCAAGTGTTTCTTCCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGgtgtggtgtg                                                                                                                                                  >  2:182728/1‑148 (MQ=255)     aaGTGTTTCTTCCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGaa                                                                                                                                               >  1:326895/1‑149 (MQ=255)       gtgtTTCTTCCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCTCTACGTCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGTTGTGGAACg                                                                                                                                             <  2:76028/149‑1 (MQ=255)               tcCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACg                                                                                                                                             >  5:177402/1‑141 (MQ=255)               tcCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACg                                                                                                                                             <  6:177402/141‑1 (MQ=255)                  tgctgACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGc                                                                                                                                  >  5:180502/1‑149 (MQ=255)                  tgctgACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGc                                                                                                                                  >  1:151138/1‑149 (MQ=255)                    ctgACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGc                                                                                                                                  <  3:163342/147‑1 (MQ=255)                        ccTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAg                                                                                                                            <  6:226979/149‑1 (MQ=255)                             gcggcggcgATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCtt                                                                                                                        <  6:180502/148‑1 (MQ=255)                             gcggcggcgATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCtt                                                                                                                        <  6:221078/148‑1 (MQ=255)                             gcggcggcgATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCtt                                                                                                                        <  6:244635/148‑1 (MQ=255)                               ggcggcgATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGc                                                                                                                     <  5:322180/149‑1 (MQ=255)                               ggcggcgATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTGCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGc                                                                                                                     <  6:262164/149‑1 (MQ=255)                                           ggagATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGACCTACAGGCTTGGCTGCAGGCACGCt                                                                                                         >  7:76874/4‑149 (MQ=255)                                           ggCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCt                                                                                                         >  7:251798/1‑149 (MQ=255)                                                tcagcTCCGGTGGCATTGCCGAGCTGGCGCGGTTCGTGCCGCAGTTTTTCGCTACGGCGTTGATCGTGGCGGTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTTCAGGCTTGGCTGCAGGCAGGCTTCGgc                                                                                                    <  8:157717/149‑1 (MQ=255)                                                  atcTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGgcg                                                                                                   <  7:82592/148‑1 (MQ=255)                                                   catcgcggtaccgcccacggcgcgcgcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCa                                                                                                 <  4:95863‑M1/52‑1 (MQ=255)                                                       gcggtaccgcccacggcgcgcgcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGt                                                                                             <  5:192525‑M1/56‑1 (MQ=255)                                                         ggggCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGgcgc                                                                                                  <  7:151382/142‑1 (MQ=255)                                                         ggggCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGgcgc                                                                                                  >  8:151382/1‑142 (MQ=255)                                                           taccgcccacggcgcgcgcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCa                                                                                         >  3:95863‑M1/90‑149 (MQ=255)                                                           ggCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGgtgtggtgtg                                                                                                                                                  >  3:200993/1‑92 (MQ=255)                                                           ggCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGgtgtggtgtg                                                                                                                                                  <  4:200993/92‑1 (MQ=255)                                                           ggCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCtt                                                                                                                        >  3:310856/1‑118 (MQ=255)                                                           ggCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCtt                                                                                                                        <  4:310856/118‑1 (MQ=255)                                                             ccgcccacggcgcgcgcccagcaacagcaccgccgccagcgccagccagccccccatggcgtgtaccaccacagacccggcaaagtcGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCAc                                                                                        >  6:192525‑M1/88‑148 (MQ=255)                                                              aTTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGa                                                                                      <  3:12335/149‑1 (MQ=255)                                                                   cGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTg                                                                                 >  5:65675/1‑149 (MQ=255)                                                                          gcgcGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTc                                                                          >  1:325126/1‑149 (MQ=255)                                                                               gTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTgtgg                                                                     <  3:97040/149‑1 (MQ=255)                                                                                ttCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTgtggt                                                                    <  2:326895/149‑1 (MQ=255)                                                                                   gTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGtggtgg                                                                  <  1:182728/148‑1 (MQ=255)                                                                                   gTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGAGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTggtggt                                                                 <  6:168557/149‑1 (MQ=255)                                                                                    tGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTa                                                                                                                               >  4:316404/1‑86 (MQ=255)                                                                                    tGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTa                                                                                                                               <  3:316404/86‑1 (MQ=255)                                                                                     gCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTa                                                                >  1:125285/1‑148 (MQ=255)                                                                                       cGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTacac                                                             >  1:344416/1‑149 (MQ=255)                                                                                       cGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTacac                                                             <  2:151138/149‑1 (MQ=255)                                                                                                  gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCtgtg                                                                      >  8:223514/1‑129 (MQ=255)                                                                                                  gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCtgtg                                                                      <  7:223514/129‑1 (MQ=255)                                                                                                  gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATgggggg                                                  >  1:324793/1‑149 (MQ=255)                                                                                                    tACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGggct                                                >  7:177494/1‑149 (MQ=255)                                                                                                             gATCGTGGCGTTCGTCTATGCGTTCTTCGAGGGTGGGGTGTGGTACGGTAATCTGGACCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGGCTGTGGTGGTACACGCCATGGGGGGCTGgctggcg                                        <  8:76874/148‑1 (MQ=255)                                                                                                             gATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGgctggcg                                        <  2:325126/148‑1 (MQ=255)                                                                                                                  tGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGctggcgctggcg                                  >  1:144943/1‑149 (MQ=255)                                                                                                                  tGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGctggcgctggcg                                  <  2:125285/149‑1 (MQ=255)                                                                                                                       ttCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGt                             >  8:118177/1‑149 (MQ=255)                                                                                                                          gTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCt                          >  7:111302/1‑149 (MQ=255)                                                                                                                               tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATgggg                                                    <  2:83578/118‑1 (MQ=255)                                                                                                                               tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATgggg                                                    >  1:83578/1‑118 (MQ=255)                                                                                                                               tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGt                        <  2:144943/146‑1 (MQ=255)                                                                                                                                  gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCCCGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACCCGCCATGGGGGGCTGGCTGGCGCTGGCGTCGGGGGTGTTGc                     >  8:327858/1‑146 (MQ=255)                                                                                                                                  gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGggctg                                               <  7:75169/120‑1 (MQ=255)                                                                                                                                  gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGggctg                                               >  8:75169/1‑120 (MQ=255)                                                                                                                                  gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTgg                  <  4:2646/149‑1 (MQ=255)                                                                                                                                  gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTgg                  <  2:324793/149‑1 (MQ=255)                                                                                                                                  gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTGCCACGACTTTGCCGGGTCTGTGGGGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGc                     <  7:327858/146‑1 (MQ=255)                                                                                                                                      ttcGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGgcgc              >  3:7759/1‑149 (MQ=255)                                                                                                                                              tgtggtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTg      <  8:251798/149‑1 (MQ=255)                                                                                                                                                 ggtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGc   <  2:344416/149‑1 (MQ=255)                                                                                                                                                  gtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCg  >  6:144301/1‑149 (MQ=255)                                                                                                                                                  gtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCg  >  6:77870/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GGTCAAGTGTTTCTTCCTGCTGACCTTCGCGGCGGCGATTCCGGCGATCATCTCCGGGGGCATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCCATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCG  >  NC_002947/2403652‑2403945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.