New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2403799 =	54 (0.960)	4 (0.080)	4/238	NT	7.2%	coding (426/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2403860 =	54 (1.040)					coding (487/1209 nt)	PP_2106	ammonium transporter

ATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGCTC  >  NC_002947/2403713‑2404008                                                                                                                                                    |                                                                                                                                                      aTTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGa                                                                                                                                                      <  3:12335/149‑1 (MQ=255)      cGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTg                                                                                                                                                 >  5:65675/1‑149 (MQ=255)             gcgcGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTc                                                                                                                                          >  1:325126/1‑149 (MQ=255)                  gTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTgtgg                                                                                                                                     <  3:97040/149‑1 (MQ=255)                   ttCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTgtggt                                                                                                                                    <  2:326895/149‑1 (MQ=255)                      gTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGtggtgg                                                                                                                                  <  1:182728/148‑1 (MQ=255)                      gTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGAGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTggtggt                                                                                                                                 <  6:168557/149‑1 (MQ=255)                        gCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTa                                                                                                                                >  1:125285/1‑148 (MQ=255)                          cGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTacac                                                                                                                             >  1:344416/1‑149 (MQ=255)                          cGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTacac                                                                                                                             <  2:151138/149‑1 (MQ=255)                                     gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCtgtg                                                                                                                                      <  7:223514/129‑1 (MQ=255)                                     gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCtgtg                                                                                                                                      >  8:223514/1‑129 (MQ=255)                                     gcTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATgggggg                                                                                                                 >  1:324793/1‑149 (MQ=255)                                       tACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGggct                                                                                                               >  7:177494/1‑149 (MQ=255)                                                gATCGTGGCGTTCGTCTATGCGTTCTTCGAGGGTGGGGTGTGGTACGGTAATCTGGACCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGGCTGTGGTGGTACACGCC‑ATGGGGGGCTGgctggcg                                                                                                       <  8:76874/148‑1 (MQ=255)                                                gATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGgctggcg                                                                                                       <  2:325126/148‑1 (MQ=255)                                                     tGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGctggcgctggcg                                                                                                 >  1:144943/1‑149 (MQ=255)                                                     tGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGctggcgctggcg                                                                                                 <  2:125285/149‑1 (MQ=255)                                                          ttCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGt                                                                                            >  8:118177/1‑149 (MQ=255)                                                             gTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCt                                                                                         >  7:111302/1‑149 (MQ=255)                                                                  tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATgggg                                                                                                                   >  1:83578/1‑118 (MQ=255)                                                                  tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATgggg                                                                                                                   <  2:83578/118‑1 (MQ=255)                                                                  tCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGt                                                                                       <  2:144943/146‑1 (MQ=255)                                                                     gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCCCGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACCCGCC‑ATGGGGGGCTGGCTGGCGCTGGCGTCGGGGGTGTTGc                                                                                    >  8:327858/1‑146 (MQ=255)                                                                     gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGggctg                                                                                                              >  8:75169/1‑120 (MQ=255)                                                                     gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGggctg                                                                                                              <  7:75169/120‑1 (MQ=255)                                                                     gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTgg                                                                                 <  2:324793/149‑1 (MQ=255)                                                                     gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTgg                                                                                 <  4:2646/149‑1 (MQ=255)                                                                     gTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTGCCACGACTTTGCCGGGTCTGTGGGGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGc                                                                                    <  7:327858/146‑1 (MQ=255)                                                                         ttcGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGgcgc                                                                             >  3:7759/1‑149 (MQ=255)                                                                                 tgtggtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTg                                                                     <  8:251798/149‑1 (MQ=255)                                                                                    ggtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGc                                                                  <  2:344416/149‑1 (MQ=255)                                                                                     gtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCg                                                                 >  6:144301/1‑149 (MQ=255)                                                                                     gtgtggAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCg                                                                 >  6:77870/1‑149 (MQ=255)                                                                                       gtggaacggtgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCgg                                                                >  6:192525‑M2/62‑148 (MQ=255)                                                                                        tggaacggtgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTa                                                              >  3:95863‑M2/61‑149 (MQ=255)                                                                                          GAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTTGGCGCGCGCCGTGGGCGGTAcc                                                            <  5:362613‑M1/149‑1 (MQ=255)                                                                                          GAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTAcc                                                            <  4:254121‑M1/149‑1 (MQ=255)                                                                                           AACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGt                                                                                            <  7:301157‑M1/116‑1 (MQ=255)                                                                                           AACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGt                                                                                            >  8:301157‑M1/1‑116 (MQ=255)                                                                                            acggtgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACcgc                                                          <  5:192525‑M2/93‑1 (MQ=255)                                                                                            ACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACcgc                                                          >  6:65675‑M1/1‑149 (MQ=255)                                                                                              GGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGACTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGa                                                        <  5:336331‑M1/149‑1 (MQ=255)                                                                                                tgcgccgaagcgtgcctgcagccaagcctgtaggcccagattaccgttccacGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATg                                                      <  4:95863‑M2/97‑1 (MQ=255)                                                                                                TAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATg                                                      <  4:166151‑M1/149‑1 (MQ=255)                                                                                                 aaTCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGACTGGCTGGCGCTggcgg                                                                                                >  5:17181/1‑106 (MQ=255)                                                                                                 aaTCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGACTGGCTGGCGCTggcgg                                                                                                <  6:17181/106‑1 (MQ=255)                                                                                                  aTCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATgg                                                     <  5:77870/148‑1 (MQ=255)                                                                                                  aTCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATgg                                                     <  6:362613/148‑1 (MQ=255)                                                                                                     tGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGt                                                 >  1:160825/1‑149 (MQ=255)                                                                                                       ggCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGt                                                 <  3:254121/147‑1 (MQ=255)                                                                                                       ggCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGACTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGttt                                               <  6:336331/149‑1 (MQ=255)                                                                                                            aCAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGc                                                                  >  5:93260/1‑125 (MQ=255)                                                                                                            aCAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGc                                                                  <  6:93260/125‑1 (MQ=255)                                                                                                            aCAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtggtgg                                          >  1:165011/1‑149 (MQ=255)                                                                                                             cAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtggtgg                                          <  8:177494/148‑1 (MQ=255)                                                                                                                gCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCttt                                      >  3:281018/1‑149 (MQ=255)                                                                                                                gCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCttt                                      >  3:321633/1‑149 (MQ=255)                                                                                                                      cTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTgcgc                                 >  3:46418/1‑148 (MQ=255)                                                                                                                       tGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtgg                                             >  2:324557/1‑135 (MQ=255)                                                                                                                       tGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtgg                                             <  1:324557/135‑1 (MQ=255)                                                                                                                       tGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCa                               >  3:280995/1‑149 (MQ=255)                                                                                                                              aCGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCa                        >  8:107466/1‑149 (MQ=255)                                                                                                                                  ttCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtggt                                            <  1:249422/125‑1 (MQ=255)                                                                                                                                  ttCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTtggt                                            >  2:249422/1‑125 (MQ=255)                                                                                                                                    cGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTcc                    <  3:166151/147‑1 (MQ=255)                                                                                                                                       cgcACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCttt                                      <  7:64924/126‑1 (MQ=255)                                                                                                                                       cgcACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCttt                                      >  8:64924/1‑126 (MQ=255)                                                                                                                                                 cacGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTggg     <  2:165011‑M2/146‑1 (MQ=255)                                                                                                                                                 cACGACTTTGCCGGGTCTGTGGTGGTACACGCCGATGGGGGGATGCATGCCGATGGCGGCGGTGCTTTTGATGGGCGCCCGCCGTGGCCGGTACCGCGAGGGGCGTTTGTTGGCTTTTGCGCCAGCGTCAATTCCCTTGATGgccgtgg      >  1:48506/1‑144 (MQ=255)                                                                                                                                                  acGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCCCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGc    >  7:251809‑M2/3‑149 (MQ=255)                                                                                                                                                    gACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGCTc  >  4:145576/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ATTGCCGAGCGGGCGCGGTTCGTGCCGCAGTTGTGCGCTACGGCGTTGATCGTGGCGTTCGTCTATCCGTTCTTCGAGGGTGTGGTGTGGAACGGTAATCTGGGCCTACAGGCTTGGCTGCAGGCACGCTTCGGCGCACCGTTCCACGACTTTGCCGGGTCTGTGGTGGTACACGCC‑ATGGGGGGCTGGCTGGCGCTGGCGGCGGTGCTGTTGCTGGGCGCGCGCCGTGGGCGGTACCGCGATGGGCGTTTGGTGGCTTTTGCGCCATCGAGCATTCCCTTTCTGGCGCTGGGCTC  >  NC_002947/2403713‑2404008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.