New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2542061 =51 (0.900)3 (0.060) 3/248 NT 5.5% coding (595/993 nt) PP_2234 AraC family transcriptional regulator
?NC_002947 2542124 = 54 (0.990)coding (658/993 nt) PP_2234 AraC family transcriptional regulator

AGGGTGCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGCGCG  >  NC_002947/2541914‑2542207
                                                                                                                                                   |                                                                                                                                                     
aGGGTGCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGc                                                                                                                                                      >  1:211999/1‑149 (MQ=255)
     gCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑Tc                                                                                                                                                >  1:277149/1‑148 (MQ=255)
         gTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATcc                                                                                                                                          <  4:117341/149‑1 (MQ=255)
          tAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCg                                                                                                                                         <  7:277700/149‑1 (MQ=255)
             agGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGcc                                                                                                                                                     <  3:54230/137‑1 (MQ=255)
             agGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTc                                                                                                                                      >  5:310189/1‑149 (MQ=255)
             agGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCCGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGcc                                                                                                                                                     >  4:54230/1‑137 (MQ=255)
               gCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTcgc                                                                                                                                    >  3:215472/1‑149 (MQ=255)
               gCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTcgc                                                                                                                                    >  2:75440/1‑149 (MQ=255)
                      agcCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGcgccg                                                                                                                             >  7:267606/1‑149 (MQ=255)
                       gcCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACAACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGcgccgc                                                                                                                            <  4:157552/149‑1 (MQ=255)
                              cTGGATGAGGGCGACATGGAGTCGTCGGCAGGGTTGATGGCCTGGCCGGTCCTCGGCTTGCGCCTGGTGTAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACGGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCggg                                                                                                                     <  8:245341/149‑1 (MQ=255)
                                  aTGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCt                                                                                                                 <  1:65784/149‑1 (MQ=255)
                                      cGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTgtgt                                                                                                             <  2:277149/149‑1 (MQ=255)
                                       ggCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTgtgt                                                                                                             >  1:17103/1‑148 (MQ=255)
                                        gCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTc                                                                                                           <  2:1044/149‑1 (MQ=255)
                                              tCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCcg                                                                                                     >  5:149014/1‑149 (MQ=255)
                                                gTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCcgcg                                                                                                   >  3:244692/1‑149 (MQ=255)
                                                      tCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGa                                                                                             >  3:184509/1‑149 (MQ=255)
                                                        ggCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGa                                                                                             <  2:211999/147‑1 (MQ=255)
                                                             ggTAGATGGCCTGGACGGACCTCGGCTTCCCCCTGGTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCACGCTAACTGGCCG‑‑ACGATCCGGTAGCGGTGCCGCTGCCCGGCGCAGTGTTCAACCAGCGCCTGGACCACGGc                                                                                      >  4:156502/1‑149 (MQ=255)
                                                                  gcaggccgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgacga                                                                                 >  8:71052‑M1/82‑149 (MQ=255)
                                                                  aTGCCCTTGACGGACCTCGGCTTGCGCCTGCTGGAGGGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgacga                                                                                 <  8:170375/149‑1 (MQ=255)
                                                                      ccTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGcc                                                                             >  4:63872/1‑149 (MQ=255)
                                                                       cTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGc                                                                                      <  5:331100/139‑1 (MQ=255)
                                                                       cTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGc                                                                                      >  6:331100/1‑139 (MQ=255)
                                                                        cgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgac                                                                                   <  3:212850‑M1/66‑1 (MQ=255)
                                                                        cgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgac                                                                                   >  4:212850‑M1/76‑141 (MQ=255)
                                                                          gacggacCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACTGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCgtg                                                                          <  4:244692/148‑1 (MQ=255)
                                                                           acggacGTCGGGTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGTGCCGCTGGCCGGCGCTGTGTTCAACCCGCGCATGGACCACGGCGACGAGGCCGTGtt                                                                        <  3:156502/149‑1 (MQ=255)
                                                                              gacCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGaa                                                                     <  5:249728/149‑1 (MQ=255)
                                                                                 cTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGt                                                                  >  4:42542/1‑149 (MQ=255)
                                                                                   cGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTg                                                                 >  2:304087/1‑148 (MQ=255)
                                                                                          cgcCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACt                                                          <  2:17103/148‑1 (MQ=255)
                                                                                            ccTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGt                                                       <  6:310189/149‑1 (MQ=255)
                                                                                            ccTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGt                                                       >  1:156244/1‑149 (MQ=255)
                                                                                                ctgGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGc                                                    <  1:75440/148‑1 (MQ=255)
                                                                                                   gAGCGCTTTTTGGGGACGACGGTGGCTCATGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAg                                                  <  4:65195/147‑1 (MQ=255)
                                                                                                    aGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGCATCAGATCCGGTATTGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAg                                                  <  1:115805/149‑1 (MQ=255)
                                                                                                          ttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGc                                         >  6:129676/1‑149 (MQ=255)
                                                                                                           tttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGc                                         <  2:156244/148‑1 (MQ=255)
                                                                                                             tGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCgg                                       <  4:215472/148‑1 (MQ=255)
                                                                                                              ggggACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCtgt                                                                                                               >  6:103857/1‑75 (MQ=255)
                                                                                                              ggggACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCtgt                                                                                                               <  5:103857/75‑1 (MQ=255)
                                                                                                              ggggACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCggg                                      >  5:156283/1‑148 (MQ=255)
                                                                                                               gggACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCa                                    <  6:149014/149‑1 (MQ=255)
                                                                                                                ggACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAg                                   >  7:115474/1‑149 (MQ=255)
                                                                                                                  acgacgGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGaa                                                                     >  5:338313/1‑113 (MQ=255)
                                                                                                                  acgacgGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGaa                                                                     <  6:338313/113‑1 (MQ=255)
                                                                                                                       ggTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATg                                           >  8:29043/1‑134 (MQ=255)
                                                                                                                       ggTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATg                                           <  7:29043/134‑1 (MQ=255)
                                                                                                                           gCTCAGGAGACCGCTCGCTATCTGGCCG‑‑GCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACGCGCTCCTGGACGACGGCGACGAGGCCGTGTTGATGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCt                        <  7:309214/149‑1 (MQ=255)
                                                                                                                             tCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTgg                      >  8:157753/1‑149 (MQ=255)
                                                                                                                               aGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCGGCTGCCCGGCGCTGTGTTTAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGTGCAATGGCGGGCAGGATGCCGACCTgg                      <  8:267606/147‑1 (MQ=255)
                                                                                                                               aGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGc                     >  3:11431/1‑148 (MQ=255)
                                                                                                                                 gagaCCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGCACCACGGCGACCAGGCCGTGATGAAGGTGCAGCACTGGTTGCACGCCAATGGCGCGCAGGATGCCGACCTGGCCAc                  >  4:349589/1‑149 (MQ=255)
                                                                                                                                           gctATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATggcggc         <  4:184509/148‑1 (MQ=255)
                                                                                                                                              aTCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCa                   >  5:204090/1‑135 (MQ=255)
                                                                                                                                              aTCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCa                   <  6:204090/135‑1 (MQ=255)
                                                                                                                                               tCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCGGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCCTGGTGAAGGGGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGCTGCCGACCTCGCCACGATGCCGGCCTgcg    >  8:298305/1‑149 (MQ=255)
                                                                                                                                                 tGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGcgcg  >  7:291035/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
AGGGTGCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCG‑‑TCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGCGCG  >  NC_002947/2541914‑2542207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.