New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3400459	58 (1.030)	3 (0.050)	3/250	NT	5.1%	coding (111/549 nt)	PP_3006	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	= 3400496	56 (1.020)					coding (74/549 nt)	PP_3006	ECF family RNA polymerase sigma‑70 factor

AGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGC  >  NC_002947/3400313‑3400606                                                                                                                                                    |                                                                                                                                                    aGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCcag                                                                                                                                                   >  4:159602/1‑149 (MQ=255) aGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCcag                                                                                                                                                   <  1:87835/149‑1 (MQ=255)        gggTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGgcgc                                                                                                                                            >  2:128330/1‑149 (MQ=255)          gTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGgcgcgc                                                                                                                                          >  4:162415/1‑149 (MQ=255)          gTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGgcgcgc                                                                                                                                          <  5:186942/149‑1 (MQ=255)                cTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTc                                                                                                                                    >  7:2688/1‑149 (MQ=255)                      aTCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATc                                                                                                                              <  3:314633/149‑1 (MQ=255)                       tCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATc                                                                                                                              <  8:2688/148‑1 (MQ=255)                       tCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCg                                                                                                                             >  3:174656/1‑149 (MQ=255)                       tCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCg                                                                                                                             <  5:50952/149‑1 (MQ=255)                          aGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGCGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTa                                                                                                                           <  1:53801/149‑1 (MQ=255)                          aGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCg                                                                                                                             >  5:204510/1‑146 (MQ=255)                              tCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAgcg                                                                                                                      >  8:337859/1‑149 (MQ=255)                                 agccgagccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCt                                                                                                                   >  4:338278/1‑149 (MQ=255)                                        ccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCtgcaggcgctctacgatcacgaaggcgcgcgcctgctgggc                                                                                                            <  2:236934‑M1/149‑42 (MQ=255)                                          gcgcgcCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGccc                                                                                                          >  6:91450/1‑149 (MQ=255)                                            gcgcCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGt                                                                                                        <  6:204510/149‑1 (MQ=255)                                                 gggTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTc                                                                                                   <  1:128330/149‑1 (MQ=255)                                                    tCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCAcc                                                                                                <  7:284588/149‑1 (MQ=255)                                                      gTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCt                                                                                              >  4:227995/1‑149 (MQ=255)                                                        aGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTaga                                                                                                                         >  1:33509/1‑120 (MQ=255)                                                        aGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTaga                                                                                                                         <  2:33509/120‑1 (MQ=255)                                                         gctggctgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCtgt                                                                                            <  3:162415/148‑1 (MQ=255)                                                             gctgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGcaca                                                                                       <  2:119494/149‑1 (MQ=255)                                                             gctgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGcac                                                                                        <  4:174656/148‑1 (MQ=255)                                                                     ggTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACa                                                                               <  6:201303/149‑1 (MQ=255)                                                                     ggTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACa                                                                               <  1:310870/149‑1 (MQ=255)                                                                        ccAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCtgcaggcgctctacgatcacgaaggcgcgcgcctgct                                                                                                                >  3:618‑M1/1‑76 (MQ=255)                                                                        ccAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCtgcaggcgctctacgatcacgaaggcgcgcgcctgct                                                                                                                <  4:618‑M1/113‑38 (MQ=255)                                                                        ccAGAGGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAgg                                                                             >  7:325547/1‑148 (MQ=255)                                                                        ccAGAGGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAgg                                                                             >  7:320963/1‑148 (MQ=255)                                                                          aGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAg                                                                          <  7:337859/149‑1 (MQ=255)                                                                                  atgatCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGaa                                                                  <  5:91450/149‑1 (MQ=255)                                                                                    gatCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATc                                                                                                                              >  2:266372/1‑87 (MQ=255)                                                                                    gatCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATc                                                                                                                              <  1:266372/87‑1 (MQ=255)                                                                                      tCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTc                                                               >  3:91409/1‑148 (MQ=255)                                                                                      tCGCATCGTGGACGATGTCTTCGGCGGTGGCGTCGTCACGTGCGATACGCCGG‑CCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAgac                                                               >  7:54841/1‑146 (MQ=255)                                                                                                   gATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGcggccg                                                 >  2:70882/1‑149 (MQ=255)                                                                                                     tGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGcggccggc                                               <  3:227995/149‑1 (MQ=255)                                                                                                       tcttctGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGa                                             <  1:70882/149‑1 (MQ=255)                                                                                                         ttctGCGGTGGCGTGGTCAGGTGCGATACGGCGG‑GAAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTTGTGCGCGTGAAGTGCGCGTTGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGt                                           <  1:282883/149‑1 (MQ=255)                                                                                                         ttctGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGaa                                                            <  7:28397/132‑1 (MQ=255)                                                                                                         ttctGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGt                                           >  7:137660/1‑149 (MQ=255)                                                                                                         ttctGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGt                                           >  3:308676/1‑149 (MQ=255)                                                                                                         ttctGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGAACAGGCTAACAGGCAGCGGTGGAAGTCGaa                                                            >  8:28397/1‑132 (MQ=255)                                                                                                          tctGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGtt                                          >  4:71487/1‑149 (MQ=255)                                                                                                               ggTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACg                                     >  1:164114/1‑149 (MQ=255)                                                                                                                   gCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgtgtg                                 >  5:248035/1‑149 (MQ=255)                                                                                                                   gCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgtgtg                                 <  8:325547/149‑1 (MQ=255)                                                                                                                   gCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgtgtg                                 <  8:320963/149‑1 (MQ=255)                                                                                                                     gtcgtcACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGtgtgtg                               >  3:339034/1‑149 (MQ=255)                                                                                                                        gtcACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCt                            >  1:347130/1‑149 (MQ=255)                                                                                                                        gtcACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCt                            >  1:352683/1‑149 (MQ=255)                                                                                                                           aCGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTcc                         <  3:338278/149‑1 (MQ=255)                                                                                                                            cGTGCGATACGCCGG‑GCAACGCCCACCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCt                        >  3:186263/1‑149 (MQ=255)                                                                                                                             gTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCtt                       <  2:164114/149‑1 (MQ=255)                                                                                                                             gTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCtt                       <  4:339034/149‑1 (MQ=255)                                                                                                                             gTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCtt                       >  6:164562/1‑149 (MQ=255)                                                                                                                               gCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTtgt                     >  7:327797/1‑149 (MQ=255)                                                                                                                               gCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTtgt                     <  8:137660/149‑1 (MQ=255)                                                                                                                                cGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTtgtg                    <  8:327797/149‑1 (MQ=255)                                                                                                                                      gCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAgg               >  3:279320/1‑148 (MQ=255)                                                                                                                                        cGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCaa            <  4:91409/149‑1 (MQ=255)                                                                                                                                                 gCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAgggcgttgcccggcgtatcgcacgtgacgacgccaccgcagaagacatcgtccacgatgcgatcatccgcatctggacccgcgcagccagctacgacccggcgcgcgg    <  2:236934‑M2/149‑109 (MQ=255)                                                                                                                                                 gCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCg    <  4:279320/149‑1 (MQ=255)                                                                                                                                                  cccAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCaa            >  8:235250/1‑140 (MQ=255)                                                                                                                                                  cccAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCaa            <  7:235250/140‑1 (MQ=255)                                                                                                                                                  cccAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCgg   >  1:275505/1‑149 (MQ=255)                                                                                                                                                   ccAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCCCAGGCTAACAGGCAGCGCTGGAAGTCGAAGGGGGAGGCCGGCGAGTTCAACGTGTGAGGCTTCCTTGTGTAAGGCAAGTACCCCGGc  >  8:218064/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    AGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGG‑GCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCCCGGC  >  NC_002947/3400313‑3400606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.