New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3517942 =	56 (0.990)	3 (0.060)	3/246	NT	6.3%	coding (59/432 nt)	PP_3109	hypothetical protein
	?	NC_002947	3517985 =	36 (0.670)					coding (102/432 nt)	PP_3109	hypothetical protein

ATGGCGACCCACAACGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAGGGGGAAGGGCAGAAGGTCTA  >  NC_002947/3517795‑3518089                                                                                                                                                    |                                                                                                                                                     gtcagttccagcggcgtaccaacctggcccgtatggaagtaatagaccttctgcccttcccccttcaacctgatcaacccgcgccaacggcgcatagctacccggctcggacaggtacacctcccggtgcaggtcgtcgcgctccatg                                                                                                                                                      <  7:245153‑M1/1‑1 (MQ=255) gtcagttccagcggcgtaccaacctggcccgtatggaagtaatagaccttctgcccttcccccttcaacctgatcaacccgcgccaacggcgcatagctacccggctcggacaggtacacctcccggtgcaggtcgtcgcgctccatGt                                                                                                                                                     >  7:59006‑M1/148‑149 (MQ=255)    gCGACCCACAACGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCa                                                                                                                                                   <  2:311947/148‑1 (MQ=255)     gttccagcggcgtaccaacctggcccgtatggaagtaatagaccttctgcccttcccccttcaacctgatcaacccgcgccaacggcgcatagctacccggctcggacaggtacacctcccggtgcaggtcgtcgcgctccatGTCACt                                                                                                                                                 <  1:349513‑M1/6‑1 (MQ=255)     cGACCCACAACGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACt                                                                                                                                                 <  6:358133/149‑1 (MQ=255)      gACCCACAACGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCTGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACtt                                                                                                                                                <  1:74485/149‑1 (MQ=255)         ccACAACGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCa                                                                                                                                             >  2:6271/1‑149 (MQ=255)              aCGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGc                                                                                                                                        <  1:246870/149‑1 (MQ=255)              aCGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGc                                                                                                                                        <  3:68410/149‑1 (MQ=255)                  ccTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCAc                                                                                                                                            <  3:322934/141‑1 (MQ=255)                  ccTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGaa                                                                                                                                    >  5:272509/1‑149 (MQ=255)                  ccTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGaa                                                                                                                                    >  6:4914/1‑149 (MQ=255)                    tGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCa                                                                                                                                             >  3:30291/1‑138 (MQ=255)                    tGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCa                                                                                                                                             <  4:30291/138‑1 (MQ=255)                    tGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAAcc                                                                                                                                  >  2:349513/1‑149 (MQ=255)                         cTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGAt                                                                                                                             <  1:6271/149‑1 (MQ=255)                            ggCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATggg                                                                                                                          <  4:177468/149‑1 (MQ=255)                            ggCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATggg                                                                                                                          <  6:272509/149‑1 (MQ=255)                            ggCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATg                                                                                                                            <  4:81927/147‑1 (MQ=255)                                 aCATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt                                                                                                                     <  6:171838/149‑1 (MQ=255)                                 aCATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt                                                                                                                     >  6:40909/1‑149 (MQ=255)                                   aTTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑ga                                                                                                                  >  8:210512/1‑149 (MQ=255)                                       tCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑gacagt                                                                                                              <  7:210512/149‑1 (MQ=255)                                       tCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATCGCAGCGGTCACTTGCACCAGCTGAACCTGGTTGGGCAGgt‑gacagt                                                                                                              >  5:173505/1‑149 (MQ=255)                                       tCGCTGCGAAACCCAAGGCCGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATCGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑gacagt                                                                                                              >  6:296153/1‑149 (MQ=255)                                         gCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑gacagtga                                                                                                            >  6:256339/1‑149 (MQ=255)                                          cagggAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑ga                                                                                                                  <  3:249055/140‑1 (MQ=255)                                          cagggAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑ga                                                                                                                  >  4:249055/3‑142 (MQ=255)                                             gaccttctgcccttcccccttcaacctgctcaacccgcgccaacggcgcatagctacccggctcggacaggtacacctcccggtgcaggtcgtcgcgctccatGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATg                                                                                                        >  7:263772‑M1/104‑149 (MQ=255)                                              gAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATg                                                                                                        >  7:184798/1‑148 (MQ=255)                                                    cAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAgcgc                                                                                                  >  8:283681/1‑148 (MQ=255)                                                        gCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGGGCGcgacga                                                                                             >  6:161759/1‑149 (MQ=255)                                                             aaTGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGc                                                                                        <  2:92276/149‑1 (MQ=255)                                                               tGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGCT‑GACAGTGACATGGAGCGCGACGACCTGCAc                                                                                      <  1:219120/149‑1 (MQ=255)                                                                 ccGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGCACCTGGATGGGCAGGT‑GCCAGTGACATGGAGCGCGACGACCTGCAcag                                                                                    >  8:245153/1‑147 (MQ=255)                                                                  cGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCgg                                                                                   <  5:40909/149‑1 (MQ=255)                                                                  cGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCgg                                                                                   >  7:121731/1‑149 (MQ=255)                                                                    acctgatcaacccgcgccaacggcgcatagctacccggctcggacaggtacacctcccggtgcaggtcgtcgcgctccatGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑gacag                                                                                                               >  5:347645‑M1/81‑119 (MQ=255)                                                                    acctgatcaacccgcgccaacggcgcatagctacccggctcggacaggtacacctcccggtgcaggtcgtcgcgctccatGTCACTTGCACCAGCTGAACCTGGATGGGCAGgt‑gacag                                                                                                               <  6:347645‑M1/39‑1 (MQ=255)                                                                     gCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGTTGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAg                                                                                <  6:173505/149‑1 (MQ=255)                                                                       ggCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGgt                                                                              <  2:187847/149‑1 (MQ=255)                                                                           ggAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTAc                                                                          <  5:4914/149‑1 (MQ=255)                                                                           ggAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTAc                                                                          <  5:296153/149‑1 (MQ=255)                                                                             aGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGGGCGCGACGACCTGCACCGGGAGGTGTACCt                                                                        <  5:161759/149‑1 (MQ=255)                                                                               cTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGt                                                                      <  8:19793/149‑1 (MQ=255)                                                                                       gCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCg                                                              <  3:324731/149‑1 (MQ=255)                                                                                           tgCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCggg                                                            <  7:283681/147‑1 (MQ=255)                                                                                           tgCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGt                                                           <  5:256339/148‑1 (MQ=255)                                                                                              gAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAga                                                        >  6:227842/1‑147 (MQ=255)                                                                                              gAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCt                                                       <  8:121731/149‑1 (MQ=255)                                                                                                        ccTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTa                                                      <  1:280625/140‑1 (MQ=255)                                                                                                        ccTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTa                                                      >  2:280625/1‑140 (MQ=255)                                                                                                          tGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTgg                                           >  5:251993/1‑149 (MQ=255)                                                                                                            ccGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACTACCTGCACCGCGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGgcg                                         >  2:302528/1‑149 (MQ=255)                                                                                                                     cgcAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGAt                                >  5:148281/1‑149 (MQ=255)                                                                                                                          ggTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGt                           <  1:148994/149‑1 (MQ=255)                                                                                                                            tCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTg                                            <  5:241222/130‑1 (MQ=255)                                                                                                                            tCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTg                                            >  6:241222/1‑130 (MQ=255)                                                                                                                              aaTCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTg                         >  3:178315/1‑147 (MQ=255)                                                                                                                                   gCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAgggg                   >  6:49277/1‑148 (MQ=255)                                                                                                                                   gCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAgggg                   >  6:180489/1‑148 (MQ=255)                                                                                                                                         cTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAGGGGGAAGGGc            <  5:227842/149‑1 (MQ=255)                                                                                                                                              gCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAGGGGGAAGGGCAGAAg       <  5:49277/149‑1 (MQ=255)                                                                                                                                                  cGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGTAGACAGTGACATGGCGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAggggg                  >  1:240615/1‑135 (MQ=255)                                                                                                                                                   ggTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAGGGGGAAGGGCAGAAGGTCTa  <  5:180489/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATGGCGACCCACAACGCCCTGGACCTGGGCTGACATTATCGCTGGGAAACCCAAGGCGGAAATGCCGAGCGGCCGGAGCTCCACACGCTGTGCGAGCGTGGAACCTGCCGGATGGGCGCAAGGTCAATCAGCCGTACTATGGCAGCGGTCACTTGCACCAGCTGAACCTGGATGGGCAGGT‑GACAGTGACATGGAGCGCGACGACCTGCACCGGGAGGTGTACCTGTCCGAGCCGGGTAGCTATGCGCCGTTGGCGCGGGTTGATCAGGTTGAAGGGGGAAGGGCAGAAGGTCTA  >  NC_002947/3517795‑3518089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.