| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3585486 = | 48 (0.850) | 4 (0.070) | 3/250 | NT | 7.3% | coding (499/762 nt) | benD | 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| ? | NC_002947 | 3585528 = | 55 (1.000) | coding (541/762 nt) | benD | 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase | |||||
CACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGACAGCAGCCTG > NC_002947/3585339‑3585632 | aatggcccccacctgcttgtcgatgctgccgtagcggtgcatcaggctgctgtcgagggtctggtcgacgatctgctggtaccagcgcttttcctgctcggtttgctctgcactgttgcgcggtacgcgccggggcggtgcttcggtgc < 1:259010‑M1/2‑1 (MQ=255)aatggcccccacctgctcgtcgatgctgccgtagcggtgcatcaggctgctgtcgagggtctggtcgacgatctgctggtaccagcgcttttcctgctcggtttgctctgcactgttgcgcggtacgcgccggggcggtgcttcggtgc < 6:197254‑M1/2‑1 (MQ=255) aCGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAAccgcc > 3:14227/1‑149 (MQ=255) gcgcTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCgccggccg < 2:91702/149‑1 (MQ=255) cgcTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGccggccgg < 5:8859/149‑1 (MQ=255) gcTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCggg < 3:259433/149‑1 (MQ=255) cATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCAGCCGGGGCATCcgc < 8:126347/148‑1 (MQ=255) aTGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGt > 3:114102/1‑149 (MQ=255) gAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCC‑TCGAAACCGCCGGCCGGGGCATCCGCGTCAACGc > 3:138520/1‑148 (MQ=255) gTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGccc < 4:14227/149‑1 (MQ=255) cgcCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCcggcg < 5:370373/149‑1 (MQ=255) gcCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCcggcgg > 5:171238/1‑149 (MQ=255) tcaggctgctgtcgagggtctggtcgacgatctgctggtaccagcgcttttcctgctcggtttgctctgcactgttgcgcggtacgcgccggggcggtgcttcggtGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCa < 7:82209‑M1/43‑1 (MQ=255) aggctgctgtcgagggtctggtcgacgatctgctggtaccagcgcttttcctgctcggtttgctctgcactgttgcgcggtacgcgccggggcggtgcttcggtGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCAc > 5:342528‑M1/105‑148 (MQ=255) aggctgctgtcgagggtctggtcgacgatctgctggtaccagcgcttttcctgctcggtttgctctgcactgttgcgcggtacgcgccggggcggtgcttcggtGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCAc > 2:87498‑M1/105‑148 (MQ=255) ggctgctgtcgagggtctggtcgacgatctgctggtaccagcgcttttcctgctcggtttgctctgcactgttgcgcggtacgcgccggggcggtgcttcggtGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCg > 8:82209‑M1/104‑149 (MQ=255) gTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGCGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCg > 2:99850/1‑148 (MQ=255) tCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGaa < 7:183007/149‑1 (MQ=255) aaTGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGc < 4:150872/149‑1 (MQ=255) tcGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGcc > 2:157960/1‑149 (MQ=255) ccATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCgg > 5:27385/1‑149 (MQ=255) tCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGgcgc < 6:354360/149‑1 (MQ=255) cTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTa > 8:245363/1‑149 (MQ=255) tACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTAc > 6:30895/1‑149 (MQ=255) cccGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTAcc < 4:114102/148‑1 (MQ=255) gcggcgTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACcgcg > 3:346289/1‑148 (MQ=255) cggcgTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCC‑TCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCaa < 4:138520/149‑1 (MQ=255) ggcgTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAAccgccg < 7:275101/79‑1 (MQ=255) ggcgTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAAccgccg > 8:275101/1‑79 (MQ=255) ggcgTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCaa < 7:245363/149‑1 (MQ=255) ggcgTCAACCGTGCGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCaa < 1:99850/149‑1 (MQ=255) aaCCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTg > 8:285763/1‑148 (MQ=255) ccTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAAc > 5:296788/1‑149 (MQ=255) cTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAAcc > 6:76325/1‑149 (MQ=255) cAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGaa < 3:143379/149‑1 (MQ=255) ccAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAg > 5:150681/1‑149 (MQ=255) gaggCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTgg > 2:259010/3‑149 (MQ=255) gTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACca > 4:200612/1‑149 (MQ=255) gTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCACCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTAc > 6:42885/1‑147 (MQ=255) aaCGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACcag > 5:334838/1‑147 (MQ=255) gcgcTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGAt > 3:270042/1‑149 (MQ=255) gcgcTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGAt < 6:27385/149‑1 (MQ=255) tCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGAtcgtc > 7:63095/1‑149 (MQ=255) tCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGAtcgtc > 1:223232/1‑149 (MQ=255) ctgcctgcCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCACCGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGCGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGCGCGTCGAc > 6:157614/1‑149 (MQ=255) ctgcctgGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCCCCGCCCCGGCGCGTACCGCGCAACAGTGCAGGGCAAACCGAGCAGGGAAAGCGCTGCTGCCAGCGGATCGTCGGCCCGa > 8:227712/1‑149 (MQ=255) cctgGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAATAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGAccc < 6:296788/149‑1 (MQ=255) tgGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCTCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTc > 5:159120/1‑149 (MQ=255) tgGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTc > 4:217523/1‑149 (MQ=255) gCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGa < 2:258630/137‑1 (MQ=255) gCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGa > 1:258630/1‑137 (MQ=255) gCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTc < 6:171238/147‑1 (MQ=255) gCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGa < 5:30895/149‑1 (MQ=255) gCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGa < 3:217523/149‑1 (MQ=255) gCCTTCGAAACCACCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTc < 5:42885/147‑1 (MQ=255) ttCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGAcag > 2:127249/1‑149 (MQ=255) gAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGAcagca < 7:285763/148‑1 (MQ=255) aaCCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGACCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGAcagcag < 4:14650/147‑1 (MQ=255) aaCCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGAACCGCGCAACAGTGCACAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGAcagcag > 3:14650/1‑147 (MQ=255) ccgccgGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGACAGCAGCCTg < 5:157614/149‑1 (MQ=255) | CACGCCGCGCTGCCGTACATGCTCGAGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCGGCGGCACCGAAGCACCGCCCCGGCGCGTACCGCGCAACAGTGCAGAGCAAACCGAGCAGGAAAAGCGCTGGTACCAGCAGATCGTCGACCAGACCCTCGACAGCAGCCTG > NC_002947/3585339‑3585632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |