New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4146460	49 (0.870)	4 (0.080)	4/242	NT	7.0%	coding (543/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4146507	61 (1.150)					coding (590/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator

GATGGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCATGACTTCGGC  >  NC_002947/4146320‑4146607                                                                                                                                             |                                                                                                                                                    gatgGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCAATCACCACCCGCAt                                                                                                                                             >  7:202310/1‑149 (MQ=255)     gCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTg                                                                                                                                         <  5:66938/149‑1 (MQ=255)     gCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTg                                                                                                                                         >  4:329715/1‑149 (MQ=255)       gagaTTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGt                                                                                                                                       >  8:193866/1‑149 (MQ=255)             cTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGc                                                                                                                                  <  7:180051/148‑1 (MQ=255)                  cATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTg                                                                                                                            <  3:329715/149‑1 (MQ=255)                   aTGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCAcc                                                                                                                               >  6:69979/1‑145 (MQ=255)                   aTGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCAcc                                                                                                                               <  5:69979/145‑1 (MQ=255)                   aTGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTgg                                                                                                                           <  1:311404/149‑1 (MQ=255)                       tCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTg                                                                                                                       >  6:193750/1‑149 (MQ=255)                                   ccGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGcc                                                                                                           >  7:337936/1‑149 (MQ=255)                                    cGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGcc                                                                                                           >  2:166668/1‑148 (MQ=255)                                      aaaCCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTAt                                                                                                        <  5:168783/149‑1 (MQ=255)                                       aaCCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATg                                                                                                       <  2:18435/149‑1 (MQ=255)                                          caccGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCgg                                                                                                    <  7:271867‑M2/149‑3 (MQ=255)                                              gCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgat                                                                                                >  8:337936‑M2/1‑143 (MQ=255)                                               ccAGCGTGGTCATCATCATGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGGTGCGCCTATGCgttgat                                                                                                >  6:118998‑M2/1‑142 (MQ=255)                                               ccAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCgcataggcgcagctggacaggcaaaggtgctcgaccagcatgcgggtggtgatg                                                                                               >  5:57367‑M1/1‑95 (MQ=255)                                               ccAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgat                                                                                                <  5:118998‑M2/148‑7 (MQ=255)                                                 aGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggc                                                                                             <  6:57367‑M1/149‑57 (MQ=255)                                                 aGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGa                                                                                             <  3:254675/149‑1 (MQ=255)                                                      ggTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCcg                                                                                        <  5:193750/149‑1 (MQ=255)                                                          accaaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccat                                                                                          <  7:170181‑M1/143‑60 (MQ=255)                                                          accaaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccat                                                                                          >  8:170181‑M1/1‑84 (MQ=255)                                                          accaaccaGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCcgac                                                                                      >  8:24877/1‑147 (MQ=255)                                                                 aGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGt                                                                             >  3:279287/1‑149 (MQ=255)                                                                 aGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGGCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGACGACGGt                                                                             <  8:202310/149‑1 (MQ=255)                                                                  gcgcCTGAACTTTCTCGATACCCTCGGGCGAGCTGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgatg                                                                                               >  3:41139‑M2/1‑123 (MQ=255)                                                                  gcgcCTGAACTTTCTCGATACCCTCGGGCGAGCTGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgatg                                                                                               <  4:41139‑M2/130‑8 (MQ=255)                                                                  gcgcCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGtt                                                                            >  2:2354/1‑149 (MQ=255)                                                                  gcgcCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGtt                                                                            >  2:8131/1‑149 (MQ=255)                                                                          aCTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCAtt                                                                    <  3:31214/149‑1 (MQ=255)                                                                           cTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCAttt                                                                   >  4:116820/1‑149 (MQ=255)                                                                            tttCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTg                                                                                                                                         <  4:195271/78‑1 (MQ=255)                                                                            tttCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTg                                                                                                                                         >  3:195271/1‑78 (MQ=255)                                                                            tttCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTg                                                                  >  2:24733/1‑149 (MQ=255)                                                                                       ccTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGCCCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAg                                                       >  5:24513/1‑149 (MQ=255)                                                                                       ccTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCAcc                                                                       <  8:229761/133‑1 (MQ=255)                                                                                       ccTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCAcc                                                                       >  7:229761/1‑133 (MQ=255)                                                                                        cTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGt                                                      <  1:8131/149‑1 (MQ=255)                                                                                        cTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGt                                                      <  1:2354/149‑1 (MQ=255)                                                                                         tCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGt                                                      >  7:22827/1‑148 (MQ=255)                                                                                            ggCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGAcc                                                  >  7:82039/1‑149 (MQ=255)                                                                                                   cGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGtt                                           <  7:193866/149‑1 (MQ=255)                                                                                                    gTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGtt                                           >  5:138659/1‑148 (MQ=255)                                                                                                        ccGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTcacca                                      >  8:64743/1‑149 (MQ=255)                                                                                                           aGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGc                                   <  8:22827/149‑1 (MQ=255)                                                                                                           aGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGc                                   >  5:353511/1‑149 (MQ=255)                                                                                                             gCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCt                                 <  1:166668/149‑1 (MQ=255)                                                                                                              cgaccgacCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCtg                                <  6:138659/149‑1 (MQ=255)                                                                                                               gaccgaccCGCACCAGATCATGGCCATCACCACCCGCATGCTGTTCGAGCACCTTGGCCAGTCCAGATGCGCCTATGCGGTGATGGACACCCACGAGCACGGTTTCACCATTTGCGGCGATGCAGAGACCCACGGATCACAACTCCagg                               >  8:159337/1‑149 (MQ=255)                                                                                                                      ccGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCa                        <  6:353511/149‑1 (MQ=255)                                                                                                                           ccAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTAt                    >  5:40110/1‑148 (MQ=255)                                                                                                                              gATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCAcc                >  4:63627/1‑149 (MQ=255)                                                                                                                                  aTGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggt                  <  7:170181‑M2/143‑85 (MQ=255)                                                                                                                                  aTGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggt                  >  8:170181‑M2/1‑59 (MQ=255)                                                                                                                                  aTGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCa            >  2:328605/1‑149 (MQ=255)                                                                                                                                   tGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCAt           <  1:328605/149‑1 (MQ=255)                                                                                                                                   tGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCAt           >  3:12781/1‑149 (MQ=255)                                                                                                                                     gCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggtgaccacgct         <  6:57367‑M2/149‑94 (MQ=255)                                                                                                                                       cATCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccatgatctggtccgggtcggtcgcctcggtcacagctcgcccgagggtatcgagaaagttcaggcgc                          >  3:41139‑M1/1‑7 (MQ=255)                                                                                                                                       cATCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccatgatctggtccgggtcggtcgcctcggtcacagctcgcccgagggtatcgagaaagttcaggcgc                          <  4:41139‑M1/130‑124 (MQ=255)                                                                                                                                       cATCACCACCCGCATGCTGGTCGAGCACCTTTGCCTGTCCAGCTGCGCCTATGCggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggtgaccacgctgg       >  5:57367‑M2/1‑54 (MQ=255)                                                                                                                                       cATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCATGACt       >  2:160418/1‑149 (MQ=255)                                                                                                                                       cATCACCACCCGCATGCTGCTCGAGCACCTTGGCCTGTCCAGCTGCGCCTAAGCGGTGATGGACCCCGACGAGGACGGTATCACCATTTGAGCCGATGCAGTGACCCCCGGTTCACCACGCCTGCTGCGCCACAATCACCTGCATGACt       >  1:162162/1‑149 (MQ=255)                                                                                                                                        aTCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggtgaccacgctggc      >  8:337936‑M1/1‑6 (MQ=255)                                                                                                                                        aTCACCgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggtgaccacgctgg       <  5:118998‑M1/148‑143 (MQ=255)                                                                                                                                        aTCAACgcataggcgcacctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgcatgatgatgaccacgctgg       >  6:118998‑M1/1‑6 (MQ=255)                                                                                                                                         tCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTc                                                                          >  5:320684/1‑80 (MQ=255)                                                                                                                                         tCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTc                                                                          <  6:320684/80‑1 (MQ=255)                                                                                                                                           accaccCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCATGACTTCgg   >  5:354242/1‑149 (MQ=255)                                                                                                                                            ccgcataggcgcagctggacaggccaaggtgctcgaccagcatgcgggtggtgatggccatgatctggtccgggtcggtcgcctcggtcacggctcgcccgagggtatcgagaaagttcaggcgctggttggtgaccacgctggcggtg  <  7:271867‑M1/149‑148 (MQ=255)                                                                                                                                             |                                                                                                                                                    GATGGCGAGATTCTGGGCATGCTCGACACGGTCACCGAAACCACCGCCAGCGTGGTCACCAACCAGCGCCTGAACTTTCTCGATACCCTCGGGCGAGCCGTGACCGAGGCGACCGACCCGGACCAGATCATGGCCATCACCACCCGCATGCTGGTCGAGCACCTTGGCCTGTCCAGCTGCGCCTATGCGGTGATGGACCCCGACGAGGACGGTTTCACCATTTGCGGCGATGCAGTGACCCCCGGTTCACCACGCCTGGTGGGCCACTATCACCTGCATGACTTCGGC  >  NC_002947/4146320‑4146607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.