New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5122388	60 (1.060)	3 (0.060)	3/248	NT	5.4%	coding (362/981 nt)	PP_4508	AraC family transcriptional regulator
	?	NC_002947	= 5122425	48 (0.880)					coding (325/981 nt)	PP_4508	AraC family transcriptional regulator

GAACACCAGCGCATCATGTGGGGCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCG  >  NC_002947/5122243‑5122536                                                                                                                                                  |                                                                                                                                                     gAACACCAGCGCATCATGTGGGGCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAgc                                                                                                                                                    <  4:170928/148‑1 (MQ=255)     acCAGCGCATCATGTGGGGCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGca                                                                                                                                                 >  1:162426/1‑147 (MQ=255)           gcATCATGTGGGGCGCAGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAg                                                                                                                                         <  5:184240/149‑1 (MQ=255)              tcatGTGGGGCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGa                                                                                                                                      >  4:341285/1‑149 (MQ=255)                      ggCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCgg                                                                                                                              >  4:351764/1‑149 (MQ=255)                      ggCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCgg                                                                                                                              <  7:117650/149‑1 (MQ=255)                       gcgcCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGgc                                                                                                                             >  8:8768/1‑149 (MQ=255)                         gcCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGgcgc                                                                                                                           >  6:369890/1‑149 (MQ=255)                          ccGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCt                                                                                                                          >  3:222693/1‑149 (MQ=255)                           cGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCtg                                                                                                                         >  8:117499/1‑149 (MQ=255)                            gAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCtgt                                                                                                                        <  1:242069/149‑1 (MQ=255)                             aaCACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCtgtg                                                                                                                       >  1:63562/1‑149 (MQ=255)                              acacCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCtgttc                                                                                                                      <  4:222693/149‑3 (MQ=255)                                acCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCg                                                                                                                    <  6:338025/149‑1 (MQ=255)                                 ccAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCtg                                                                                                                         >  2:271504/1‑143 (MQ=255)                                 ccAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCtg                                                                                                                         <  1:271504/143‑1 (MQ=255)                                  cAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCggg                                                                                                                  >  6:75631/1‑149 (MQ=255)                                    gcggcgAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTt                                                                                                                >  6:205016‑M2/1‑148 (MQ=255)                                         gAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTggcgg                                                                                                           >  1:242148/1‑149 (MQ=255)                                         gAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTggcgg                                                                                                           >  7:326972/1‑149 (MQ=255)                                         gAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTggcgg                                                                                                           <  8:85348/149‑1 (MQ=255)                                          aaTGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAacccggcacagcgccgaagcgtcgctggcctgtgcgctggcgct                                                                                                          <  8:27361‑M1/149‑45 (MQ=255)                                              ccaCGCCACCTCGGCAGGCGCGCCACGCGTCGGCTGCGGCCCCTGCACCAGCACCCGCCGCGGCTGGCCCGGCCGGCCACTGAGCCATTTGCAACGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAg                                                                                                        <  4:266913/145‑1 (MQ=255)                                               aaCGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAacccggcacagcgccgaagcgtcgctggcctgtgcgctggcgcttt                                                                                                        <  6:299714‑M1/146‑47 (MQ=255)                                               aaCGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAacccggcacagcgccgaagcgtcgctggcctgtgcgctggcgcttt                                                                                                        >  5:299714‑M1/1‑100 (MQ=255)                                               aaCGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCg                                                                                                                               >  8:301438/1‑123 (MQ=255)                                               aaCGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCg                                                                                                                               <  7:301438/123‑1 (MQ=255)                                               aaCGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAggtg                                                                                                     >  4:99828/1‑149 (MQ=255)                                                aCGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAggtgg                                                                                                    <  5:369890/149‑1 (MQ=255)                                                    cACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGc                                                                                                >  8:197131/1‑149 (MQ=255)                                                    cACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGc                                                                                                <  7:8768/149‑1 (MQ=255)                                                     aCCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGcc                                                                                               >  7:69054/1‑149 (MQ=255)                                                          gTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGc                                                                                           <  7:117499/148‑1 (MQ=255)                                                           tAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCAc                                                                                         <  8:6849/149‑1 (MQ=255)                                                              ggCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGt                                                                                      >  8:297517/1‑149 (MQ=255)                                                               gCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTc                                                                                     <  4:299416/149‑1 (MQ=255)                                                                cTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGt                                                                                      >  3:79888/1‑147 (MQ=255)                                                                   gACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAg                                                                                   <  3:341285/147‑1 (MQ=255)                                                                   gACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGaa                                                                                 >  2:18068/1‑149 (MQ=255)                                                                   gACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGa                                                                                  <  8:326972/148‑1 (MQ=255)                                                                       ttcttcGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAg                                                                             <  3:99828/149‑1 (MQ=255)                                                                                tGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTt                                                                                                                <  7:271600‑M2/105‑2 (MQ=255)                                                                                tGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTt                                                                                                                >  8:271600‑M2/1‑104 (MQ=255)                                                                                  cGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGcc                                                                    <  4:79888/147‑1 (MQ=255)                                                                                  cGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGcc                                                                    <  5:162373/147‑1 (MQ=255)                                                                                     ccccTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCgg                                                               <  7:197131/149‑1 (MQ=255)                                                                                      cccTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCggg                                                              >  3:148705/1‑149 (MQ=255)                                                                                         tGCACAAGGACCCGCCGCGGCTGGACCGGCCCGCCACTGAGCCATATGCAAAGCCCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCgggat                                                                                                                >  3:259337/1‑94 (MQ=255)                                                                                              cAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGTGAATAGCCCTCGGGGCCGAGGa                                                      <  1:18068/149‑1 (MQ=255)                                                                                                      gccgcGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCa                                                                              <  2:180305/117‑1 (MQ=255)                                                                                                      gccgcGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCa                                                                              >  1:180305/1‑117 (MQ=255)                                                                                                       ccgcGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGa                                             <  3:351764/149‑1 (MQ=255)                                                                                                          cgGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGt                                          <  4:148705/149‑1 (MQ=255)                                                                                                              tGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGa                                      <  2:162426/149‑1 (MQ=255)                                                                                                                      ccggccACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCgg                              <  8:69054/149‑1 (MQ=255)                                                                                                                       cggccACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGc                             <  5:75631/149‑1 (MQ=255)                                                                                                                        ggccACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGc                             >  6:79468/1‑148 (MQ=255)                                                                                                                           cACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCATCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCgg                              >  7:253606/1‑144 (MQ=255)                                                                                                                           cACTGAGCCATTTGCAAAGCGCCAGCGCAATGGCCAGCGACGCTTCGGCGCTGTGCGGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGTACGAAACTGAGGTCGGAGCTTTCgg                              <  8:253606/144‑1 (MQ=255)                                                                                                                            aCTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCgatga                        >  8:248017/1‑149 (MQ=255)                                                                                                                            aCTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCgatga                        >  5:235254/1‑149 (MQ=255)                                                                                                                              tGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGTGCCGa                                                         <  5:158960/114‑1 (MQ=255)                                                                                                                              tGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGa                                                         >  6:158960/1‑114 (MQ=255)                                                                                                                                aGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATgcg                    >  4:82392/1‑149 (MQ=255)                                                                                                                                    aTTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTgg                >  4:228056/1‑149 (MQ=255)                                                                                                                                        gCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGa                                             >  8:181347/1‑116 (MQ=255)                                                                                                                                        gCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGa                                             <  7:181347/116‑1 (MQ=255)                                                                                                                                         cAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAgcg           >  4:62169/1‑149 (MQ=255)                                                                                                                                          aaaGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTtggcgctttgcaaatggctcagtggccggccggtccagccgcggcgggtcctggtgcaggggccgcagccgaagaatgtcgagccttacaaggtggcgtt             <  6:299714‑M2/146‑101 (MQ=255)                                                                                                                                          aaaGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTtggcgctttgcaaatggctcagtggccggccggtccagccgcggcgggtcctggtgcaggggccgcagccgaagaatgtcgagccttacaaggtggcgtt             >  5:299714‑M2/1‑46 (MQ=255)                                                                                                                                            aGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTtggcgctttgcaaatggctcagtggccggccggtccagccgcggcgggtcctggtgcaggggccgcagccgaagaatgtcgagccttacaaggtggcgttccatt        <  8:27361‑M2/149‑106 (MQ=255)                                                                                                                                                ccAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAgg    <  3:62169/149‑1 (MQ=255)                                                                                                                                                  aacccggcacagcgccgaagcgtcgctggcctgtgcgctggcgctttgcaaatggctcagtggccggccggtccagccgcggcgggtcctggtgcaggggccgcagccgaagaatgtcgagccttacaaggtggcgttccattcgccgc  >  6:205016‑M1/1‑1 (MQ=255)                                                                                                                                                  aacccggcacagcgccgaagcgtcgctggcctgtgcgctggcgctttgcaaatggctcagtggccggccggtccagccgcggcgggtcctggtgcaggggccgca                                              >  8:271600‑M1/1‑1 (MQ=255)                                                                                                                                                  aacccggcacagcgccgaagcgtcgctggcctgtgcgctggcgctttgcaaatggctcagtggccggccggtccagccgcggcgggtcctggtgcaggggccgca                                              <  7:271600‑M1/105‑105 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GAACACCAGCGCATCATGTGGGGCGCCGAACACCAGCGGCGAATGGAACGCCACCTTGTAAGGCTCGACATTCTTCGGCTGCGGCCCCTGCACCAGGACCCGCCGCGGCTGGACCGGCCGGCCACTGAGCCATTTGCAAAGCGCCAGCGCACAGGCCAGCGACGCTTCGGCGCTGTGCCGGGTTGGCGGCAGGTGGTCGCCGTGCACGGTCAGAATCAGCGAATAGCCCTCGGGGCCGAGGACGAAACTGAGGTCGGAGCTTTCGGCGATGATGCGCTGGTAGCGCACCAGGCG  >  NC_002947/5122243‑5122536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.