New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	279835 =	49 (0.870)	4 (0.070)	4/248	NT	7.6%	coding (414/669 nt)	sctS	sulfur compound ABC transporter permease
	?	NC_002947	279908 =	50 (0.920)					coding (341/669 nt)	sctS	sulfur compound ABC transporter permease

AGGGCGGTGTCCTTTACCAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGAACAGCTGCACCAGCAGCGGCGTGCC  >  NC_002947/279761‑280056                                                                                                                                                    |                                                                                                                                                     cccgcttcgctgatcggcctgtcgctgaacatggcggcctatatctgcgagatcctgcgcgcagccatttcctcGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGtcgatcga                                                                                                                                                     >  8:19357‑M1/75‑149 (MQ=255) cccgcttcgctgatcggcctgtcgctgaacatggcggcctatatctgcgagatcctgcgcgcagccatttcctcGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGtcgatcg                                                                                                                                                      >  8:333736‑M1/75‑148 (MQ=255)       gtgtCCTTTACCAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAAt                                                                                                                                               <  8:245059/149‑1 (MQ=255)            cTTTACCAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCTGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCGTCCCACTGGCCCCGGTCGATCGAGGAAATGGCt                                                                                                                                           <  5:352136/148‑1 (MQ=255)            cTTTACCAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAg                                                                                                                                                    >  8:19254/1‑139 (MQ=255)            cTTTACCAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAg                                                                                                                                                    <  7:19254/139‑1 (MQ=255)                 ccAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAg                                                                                                                                                    <  6:14754/134‑1 (MQ=255)                 ccAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAg                                                                                                                                                    >  5:14754/1‑134 (MQ=255)                  cAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTgcgcg                                                                                                                                      >  6:342178/1‑147 (MQ=255)                          tGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCg                                                                                                                            <  5:165635/149‑1 (MQ=255)                           gAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGAtctc                                                                                                                             <  1:210351/147‑1 (MQ=255)                           gAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGAtctc                                                                                                                             >  2:210351/1‑147 (MQ=255)                                tGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGCTCGAGGAAATGGCTGCGCGCAGGATCTCGCAGata                                                                                                                      >  2:289647/1‑149 (MQ=255)                                      ccAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGgcc                                                                                                                >  7:104123/1‑149 (MQ=255)                                        aGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGgccgc                                                                                                              <  6:194126/149‑1 (MQ=255)                                           ggTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCAt                                                                                                           >  5:68717/1‑149 (MQ=255)                                           ggTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCAt                                                                                                           <  2:45216/149‑1 (MQ=255)                                            gTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTT‑CCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGt                                                                                                         >  3:117250/1‑149 (MQ=255)                                               gCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGtt                                                                                                        <  1:317600/148‑1 (MQ=255)                                               gCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGtt                                                                                                        <  1:312292/148‑1 (MQ=255)                                                cAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCa                                                                                                      <  8:104123/149‑1 (MQ=255)                                                 aaCGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGa                                                                                                                                 >  7:106443/1‑121 (MQ=255)                                                 aaCGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGa                                                                                                                                 <  8:106443/121‑1 (MQ=255)                                                 aaCGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAg                                                                                                     >  3:78583/1‑149 (MQ=255)                                                      ggggcgcAAGGCCGGTGGCAGGCTCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAACTGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACa                                                                                                <  6:343577/146‑1 (MQ=255)                                                              aGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGAt                                                                                         >  5:90311/1‑148 (MQ=255)                                                                 ccTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGc                                                                                     <  6:97176/149‑1 (MQ=255)                                                                       gCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGatat                                                                                                                     <  3:185731/111‑1 (MQ=255)                                                                       gCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGatat                                                                                                                     >  4:185731/1‑111 (MQ=255)                                                                        cAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCgg                                                                              >  2:317391/1‑149 (MQ=255)                                                                         tcgatcgaccggggccagtgggaagcagccgccagcatcggcatgacccgcgtgcaagccatgcgccgggcgatcGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCggg                                                                             >  8:19357‑M2/76‑149 (MQ=255)                                                                         aGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCggg                                                                             <  5:342178/149‑1 (MQ=255)                                                                          cgatcgaccggggccagtgggaagcagccgccagcatcggcatgacccgcgtgcaagccatgcgccgggcgatcGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCggg                                                                             >  8:333736‑M2/75‑148 (MQ=255)                                                                            ATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGAt                                                                          <  5:149423‑M1/149‑1 (MQ=255)                                                                                cccGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCggg                                                                      <  7:167863/149‑1 (MQ=255)                                                                                accggggccagtgggaagcagccgccagcatcggcatgacccgcgtgcaagccatgcgccgggcgatcGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCggg                                                                      <  7:19357‑M2/81‑1 (MQ=255)                                                                                 ccGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTT‑CCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTc                                                                    <  4:117250/149‑1 (MQ=255)                                                                                        aTGGGTTGCACGCGGGACATGCCGATGCTGGCGGCAGCTTCCCACTGGCCCCGGTCGATCGAGGAAAACGCTCCGCGCAGGATCTCGCAGATATACGCCGCCATGTTCAGCGACAGGCGGCACGGCGTCGCCGGGATCGGGTCCAGCTc                                                              >  6:223000/1‑149 (MQ=255)                                                                                        aTGGCTTGCACGCGGGTCATGCCGCTGCTGGCGGCTGCGTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCACATATAGGCCGCCATTTTCAGCGACAGGCCGATCAGCGAAGAGGGGATCGGGTCCAGCTc                                                              >  7:170580/1‑149 (MQ=255)                                                                                        aTGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTc                                                              <  4:69335/149‑1 (MQ=255)                                                                                         tGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGc                                                                                     <  2:1140/125‑1 (MQ=255)                                                                                           gCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGGCCAGCTCGAt                                                           <  6:253553/149‑1 (MQ=255)                                                                                               gCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGc                                                         <  1:317391/147‑1 (MQ=255)                                                                                                cACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCg                                                       <  2:162986/148‑1 (MQ=255)                                                                                                   gcgGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGAttt                                                   >  8:2178/1‑149 (MQ=255)                                                                                                    cgGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTg                                                  <  6:68717/149‑1 (MQ=255)                                                                                                     gggTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGc                                                 <  6:183857/149‑1 (MQ=255)                                                                                                        tCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCgggg                                                                            >  5:291883/1‑119 (MQ=255)                                                                                                        tCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCgggg                                                                            <  6:291883/119‑1 (MQ=255)                                                                                                         cATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGc                                                                                                    <  6:207268/94‑1 (MQ=255)                                                                                                         cATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGc                                                                                                    >  5:207268/1‑94 (MQ=255)                                                                                                                    tGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCCGCTCGATGCCGATTTGCGGCATGCCGaaa                                     >  7:187456/1‑146 (MQ=255)                                                                                                                         gctgctTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATGTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGAc                             >  1:88992/1‑149 (MQ=255)                                                                                                                         gctgctTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATGGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGAc                             >  4:337789/1‑149 (MQ=255)                                                                                                                         gctgctTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGAc                             <  1:181874/149‑1 (MQ=255)                                                                                                                           tgctTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCgg                                               <  2:191489/129‑1 (MQ=255)                                                                                                                           tgctTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCgg                                               >  1:191489/1‑129 (MQ=255)                                                                                                                           cgtgcaagccatgcgccgggcgatcGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGa                           <  7:333736‑M2/124‑1 (MQ=255)                                                                                                                              ttCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGaa                          >  5:357644/1‑147 (MQ=255)                                                                                                                              ttCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTAGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATAAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGaa                          >  7:63338/1‑147 (MQ=255)                                                                                                                                  cACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGAACAGCTg                    >  6:245259/1‑149 (MQ=255)                                                                                                                                                gatcGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGAACAGCTGCACCAGCAgcggcg      >  3:271840‑M2/5‑149 (MQ=255)                                                                                                                                                   cGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGAACAGCTGCACCAGCAGCGGCGTg    <  2:88992‑M2/147‑1 (MQ=255)                                                                                                                                                    gaGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGACGACGAACAGCTGCACCAGCAGCGGCGTGcc  <  1:289647/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AGGGCGGTGTCCTTTACCAGCGAGATGAAGCTGTTGCCCAGCGGTGGCAACGCGGTGCGCAAGGCCTGTGGCAGGATCGCCCGGCGCATGGCTTGCACGCGGGTCATGCCGATGCTGGCGGCTGCTTCCCACTGGCCCCGGTCGATCGAGGAAATGGCTGCGCGCAGGATCTCGCAGATATAGGCCGCCATGTTCAGCGACAGGCCGATCAGCGAAGCGGGGATCGGGTCCAGCTCGATGCCGATTTGCGGCATGCCGAAATAGATGACGAACAGCTGCACCAGCAGCGGCGTGCC  >  NC_002947/279761‑280056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.