New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1748689 =	52 (0.920)	5 (0.090)	5/246	NT	8.6%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748732 =	57 (1.060)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein

GCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCC  >  NC_002947/1748585‑1748880                                                                                                                                                     |                                                                                                                                                     gCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCgg                                                                                                                                                     <  2:255145/149‑1 (MQ=255) gCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCgg                                                                                                                                                     <  1:223524/149‑1 (MQ=255) accaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCgg                                                                                                                                                     >  2:70787‑M1/105‑149 (MQ=255)  ccaggcgccgagttaatccggcgattgagttctggtggacgttacgcaacgtagcaagcttcctcgctcgacatgtcggcccgcaggcttgctgagcaacaccG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgt                                                                                                                                                    >  7:335029‑M1/104‑149 (MQ=255)      cATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCTGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgtgt                                                                                                                                                  <  1:349086/147‑1 (MQ=255)      cATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGgtgt                                                                                                                                                  <  7:73627/147‑1 (MQ=255)       aTCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGc                                                                                                                                               >  1:139018/1‑149 (MQ=255)          aGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGCCTTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTc                                                                                                                                             <  1:270056/149‑1 (MQ=255)          aGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTc                                                                                                                                             <  7:169558/148‑1 (MQ=255)          aGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCa                                                                                                                                            <  2:139018/149‑1 (MQ=255)          aGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCa                                                                                                                                            <  3:101196/149‑1 (MQ=255)                    tCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCa                                                                                                                                            >  8:169790/1‑139 (MQ=255)                    tCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCa                                                                                                                                            <  7:169790/139‑1 (MQ=255)                          ccaccTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCg                                                                                                                            <  6:4656/149‑1 (MQ=255)                              cagCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACAt                                                                                                                        >  4:293914/3‑149 (MQ=255)                                 cATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTc                                                                                                                     <  4:108584/149‑1 (MQ=255)                                     gCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgag                                                                                                                  <  5:225943/148‑1 (MQ=255)                                     gCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgag                                                                                                                  <  2:285280/148‑1 (MQ=255)                                             ggCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGc                                                                                                         >  2:40017/1‑149 (MQ=255)                                              gCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCt                                                                                                        <  1:40017/149‑1 (MQ=255)                                                   aCGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcga                                                                                                               >  5:110056/1‑137 (MQ=255)                                                   aCGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcga                                                                                                               <  6:110056/137‑1 (MQ=255)                                                    cGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcg                                                                                                                >  6:371099/1‑135 (MQ=255)                                                    cGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTcgagcg                                                                                                                <  5:371099/135‑1 (MQ=255)                                                     gACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCgg                                                                                                                                >  2:329514/1‑118 (MQ=255)                                                     gACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCgg                                                                                                                                <  1:329514/118‑1 (MQ=255)                                                               gCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTaa                                                                                         <  4:201544/147‑1 (MQ=255)                                                               gCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGATCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAAc                                                                                        >  5:163988/1‑148 (MQ=255)                                                                 cGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                                                                     >  4:21286/1‑149 (MQ=255)                                                                 cGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                                                                     >  4:26131/1‑149 (MQ=255)                                                                  gAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTc                                                                                     >  1:349310/1‑148 (MQ=255)                                                                   aaCAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTcca                                                                                   >  7:282109/1‑149 (MQ=255)                                                                       gTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGATG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccac                                                                                  >  3:188548/1‑146 (MQ=255)                                                                           tCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGc                                                                                                                              <  8:295908/98‑1 (MQ=255)                                                                           tCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGc                                                                                                                              >  7:295908/1‑98 (MQ=255)                                                                            ccAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACt                                                                           <  3:158155/148‑1 (MQ=255)                                                                             cAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTc                                                                          >  2:227652/1‑148 (MQ=255)                                                                              aaGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCaa                                                                        >  7:93216/1‑149 (MQ=255)                                                                               aGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAAt                                                                       <  3:293914/149‑1 (MQ=255)                                                                                gCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATc                                                                      >  5:186349/1‑149 (MQ=255)                                                                                                cGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGgc                                                      <  2:349310/149‑1 (MQ=255)                                                                                                      gTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtgg                                                >  6:76000/1‑149 (MQ=255)                                                                                                      gTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtgg                                                >  3:164240/1‑149 (MQ=255)                                                                                                       ttG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGATCTCAATCGCCGGATTAACTCGGCGCCaggc                                               <  8:282109/149‑2 (MQ=255)                                                                                                       accgatttcactggctggccttggcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtgg                                                >  7:335029‑M2/47‑149 (MQ=255)                                                                                                        ccgatttcactggctggccttggcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCtggt                                               >  2:70787‑M2/46‑149 (MQ=255)                                                                                                            ttcactggctggccttggcaacagggccgagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCt                                           >  1:204540‑M2/42‑149 (MQ=255)                                                                                                             TTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCt                                           <  5:141702‑M1/148‑1 (MQ=255)                                                                                                              tcactggctggccttggcaacagggccagacgggaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTc                                          <  1:70787‑M2/109‑1 (MQ=255)                                                                                                                ccGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATc                                       >  6:313847/1‑149 (MQ=255)                                                                                                                       gCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATctgctg                                  <  1:227652/147‑1 (MQ=255)                                                                                                                        cccTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGtt                               >  3:157516/1‑149 (MQ=255)                                                                                                                         ccTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccac                                                                                  >  1:145452/1‑97 (MQ=255)                                                                                                                         ccTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTccac                                                                                  <  2:145452/97‑1 (MQ=255)                                                                                                                         ccTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATctgct                                   <  3:338397/144‑1 (MQ=255)                                                                                                                         ccTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGttt                              >  7:217178/1‑149 (MQ=255)                                                                                                                         ccTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGGGGCTCATctgct                                   >  4:338397/1‑144 (MQ=255)                                                                                                                          cTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGa                                                                              <  1:280272/100‑1 (MQ=255)                                                                                                                          cTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGa                                                                              >  2:280272/1‑100 (MQ=255)                                                                                                                            gTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGttttt                            >  2:194017/1‑148 (MQ=255)                                                                                                                               gCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGAtt                                                              >  8:327448/1‑111 (MQ=255)                                                                                                                               gCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGAtt                                                              <  7:327448/111‑1 (MQ=255)                                                                                                                                 cAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAagag                      >  2:126240/1‑149 (MQ=255)                                                                                                                                  aaGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGc                     <  5:76000/149‑1 (MQ=255)                                                                                                                                   aGGCCAGCCACTGCAATCGGTGTTGCTCAGCAATCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCg                    <  2:215360/149‑1 (MQ=255)                                                                                                                                    ggCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCgg                   <  4:157516/149‑1 (MQ=255)                                                                                                                                     gccagccaGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGAGTAACTCGGCGCCGGGTGGCTCAGCTGGGGGTTTTTACAGAGCGGt                  >  8:136016/1‑149 (MQ=17)                                                                                                                                        agccagTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGc               >  1:335990/1‑149 (MQ=255)                                                                                                                                         agacgggaaatcGGTGTTGCTCAGCACGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCt              <  8:335029‑M2/137‑1 (MQ=255)                                                                                                                                          ccagTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTg             >  2:195831/1‑149 (MQ=255)                                                                                                                                             gTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAag                        >  3:206676/1‑135 (MQ=255)                                                                                                                                             gTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAag                        <  4:206676/135‑1 (MQ=255)                                                                                                                                               gaaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCg          >  5:51595‑M2/7‑147 (MQ=255)                                                                                                                                                aaatcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAg       <  1:195831‑M2/144‑1 (MQ=255)                                                                                                                                                   tcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTg                 <  7:290257‑M2/134‑1 (MQ=255)                                                                                                                                                   tcGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTg                 >  8:290257‑M2/3‑136 (MQ=255)                                                                                                                                                     ggTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGcc  <  1:194017/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTG‑ATTTCCCGTCTGGCCCTGTTGCCAAGGCCAGCCAGTGAAATCGGTGTTGCTCAGCAAGCCTGCGGGCCGACATGTCGAGCGAGGAAGCTTGCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCC  >  NC_002947/1748585‑1748880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.