New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3213974	55 (0.970)	3 (0.060)	3/244	NT	5.4%	coding (1041/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC
	?	NC_002947	= 3214000	54 (1.010)					coding (1067/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC

CGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCA  >  NC_002947/3213853‑3214145                                                                                                                                                     |                                                                                                                                                  cGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCgg                                                                                                                                                   <  4:93718/148‑1 (MQ=255)  ggTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCGCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCgg                                                                                                                                                   >  1:98443/1‑148 (MQ=255)  ggTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGca                                                                                                                                                 >  1:125627‑M2/1‑147 (MQ=255)        gCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCg                                                                                                                                           >  5:167461/1‑149 (MQ=255)                gCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTg                                                                                                                                   >  4:142599/1‑149 (MQ=255)                      gCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGccccc                                                                                                                             >  7:275714/1‑149 (MQ=255)                       ccAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCg                                                                                                                            <  2:35901/149‑1 (MQ=255)                             gcgGGTCTTGGCCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGc                                                                                                                      <  3:328761/149‑1 (MQ=255)                                 gTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCACGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCACGGTTGGCCCCCGGTATGCCCGt                                                                                                                  >  1:59014/1‑149 (MQ=255)                                      ggTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTgcgc                                                                                                             >  2:307806/1‑149 (MQ=255)                                      ggTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTgc                                                                                                               <  2:98443/147‑1 (MQ=255)                                       gTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGcc                                                                                                            >  7:16833/1‑149 (MQ=255)                                        tCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCt                                                                                                           >  5:260645/1‑149 (MQ=255)                                          gCCACCAATGGCAACGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGtt                                                                                                                 >  2:122914/1‑141 (MQ=255)                                          gCCACCAATGGCAACGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGtt                                                                                                                 <  1:122914/141‑1 (MQ=255)                                            caccaATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTgcgc                                                                                                       <  6:167461/149‑1 (MQ=255)                                            caccaATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTgcg                                                                                                        >  4:52024/1‑148 (MQ=255)                                            caccaATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTgcg                                                                                                        >  8:134299/1‑148 (MQ=255)                                            caccaATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTgcg                                                                                                        >  2:267151/1‑148 (MQ=255)                                                 aTGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGaaa                                                                                                  <  4:152571/149‑1 (MQ=255)                                                 aTGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGaaa                                                                                                  <  2:82099/149‑1 (MQ=255)                                                 aTGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTAGGCAGACCCGCAGGGTTGGCACCCGGTATGCCCGTTGCGCCTGCGCAGaaa                                                                                                  >  8:280494/1‑149 (MQ=255)                                                      aTCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCGGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGaaacaaac                                                                                             >  4:330274/1‑149 (MQ=255)                                                      aTCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGaaacaaac                                                                                             <  1:267151/149‑1 (MQ=255)                                                          c‑cGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCt                                                                                         <  1:307806/149‑1 (MQ=255)                                                                gCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTgccgc                                                                                    >  4:281066/1‑149 (MQ=255)                                                                   cgcgcgGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCa                                                                                 <  8:275714/149‑1 (MQ=255)                                                                      gcgGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGt                                                                               >  6:327451/1‑148 (MQ=255)                                                                             gcACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAg                                                                       <  3:82946/149‑1 (MQ=255)                                                                                  ggCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAg                                                                  >  6:144807/1‑149 (MQ=255)                                                                                   gCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGt                                                                 <  3:52024/149‑1 (MQ=255)                                                                                    cGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTg                                                                <  2:59014/149‑1 (MQ=255)                                                                                     gTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTga                                                               <  8:192850/149‑1 (MQ=255)                                                                                       gATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTg                                                                                                                                   <  7:275987/79‑1 (MQ=255)                                                                                       gATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTg                                                                                                                                   >  8:275987/1‑79 (MQ=255)                                                                                         tGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGa                                                                        <  2:224511/136‑1 (MQ=255)                                                                                         tGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGa                                                                        >  1:224511/1‑136 (MQ=255)                                                                                         tGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATg                                                           >  2:927/1‑149 (MQ=255)                                                                                           cAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTc                                                         <  5:327451/149‑1 (MQ=255)                                                                                                     gcTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGttcttc                                               <  3:281066/149‑1 (MQ=255)                                                                                                      cTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCTGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTca                                              <  3:330274/149‑1 (MQ=255)                                                                                                       tGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGcagcccctcggtaatctgccagcgcgagccttgcatcacgccggtgcgcaccgcgcgtgcctcggcgatgccattggtggcgaccaagacccgcgcctggcc                                             <  5:268834‑M2/149‑103 (MQ=255)                                                                                                       tGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTga                                                               >  4:290425/1‑131 (MQ=255)                                                                                                       tGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTga                                                               <  3:290425/131‑1 (MQ=255)                                                                                                                aCCGCGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGccc                                    <  4:227075/149‑1 (MQ=255)                                                                                                                aCCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGccc                                    <  4:222429/149‑1 (MQ=255)                                                                                                                  cGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGaa                                                                   <  4:68428/116‑1 (MQ=255)                                                                                                                  cGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGaa                                                                   >  3:68428/1‑116 (MQ=255)                                                                                                                  cGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCg                                   >  3:313486/1‑148 (MQ=255)                                                                                                                   gAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGcagcccctcggtaatctgccagcgcgagccttgcatcacgccggtgcgcaccgcgcgtgcctcggcgatg                                                                             <  8:239253‑M2/105‑71 (MQ=255)                                                                                                                   gAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGcagcccctcggtaatctgccagcgcgagccttgcatcacgccggtgcgcaccgcgcgtgcctcggcgatg                                                                             >  7:239253‑M2/1‑35 (MQ=255)                                                                                                                     ggggCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTGCATCCATCGCCCGAACt                               >  4:210237/1‑149 (MQ=255)                                                                                                                        gCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCg                            >  7:5564/1‑149 (MQ=255)                                                                                                                            gAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGcc                          <  1:927/147‑1 (MQ=255)                                                                                                                            gAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGcc                          <  5:144807/147‑1 (MQ=255)                                                                                                                                   gCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTg                 <  3:142599/149‑1 (MQ=255)                                                                                                                                   gCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTg                 <  6:260645/149‑1 (MQ=255)                                                                                                                                    cGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGATATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTgg                <  7:280494/149‑1 (MQ=255)                                                                                                                                      aTCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTgg                       <  8:280247/140‑1 (MQ=255)                                                                                                                                      aTCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTgg                       >  7:280247/1‑140 (MQ=255)                                                                                                                                          cctGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTgg                       <  3:290679/134‑1 (MQ=255)                                                                                                                                                 gtcgGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCAttt    <  8:5564/148‑1 (MQ=255)                                                                                                                                                 gtcgGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTATTCAttt    >  4:197746/1‑148 (MQ=255)                                                                                                                                                  tcgGCGGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCAttt    >  7:321513/1‑147 (MQ=255)                                                                                                                                                  tcgGCGGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCa  >  7:326072/1‑149 (MQ=255)                                                                                                                                                  tcgGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCa  >  5:317825/1‑149 (MQ=255)                                                                                                                                                     gCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTcatccatc                                        <  6:46494/108‑1 (MQ=255)                                                                                                                                                     gCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTcatccatc                                        >  5:46494/1‑108 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGC‑CGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCATCGCCCGAACTTCGCCTGGGTCGTGGCGTTGTTCATTTCA  >  NC_002947/3213853‑3214145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.