New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3364670	65 (1.150)	5 (0.090)	5/248	NT	8.0%	coding (556/879 nt)	PP_2961	LysR family transcriptional regulator
	?	NC_002947	= 3364696	52 (0.960)					coding (530/879 nt)	PP_2961	LysR family transcriptional regulator

AATGGCCTCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCAT  >  NC_002947/3364548‑3364820                                                                                                                                                     |                                                                                                                             aaTGGCCTCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGtggct                                                                                                                              >  7:79636/1‑149 (MQ=255)      ccTCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTggcca                                                                                                                         <  5:164499‑M2/149‑6 (MQ=255)        tCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATg                                                                                                                       >  4:121720/1‑149 (MQ=255)          gCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATg                                                                                                                       <  6:164499/147‑1 (MQ=255)          gCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATCCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATgg                                                                                                                      <  1:252517/148‑1 (MQ=255)              ttgttgCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGa                                                                                                                   <  4:101913/147‑1 (MQ=255)              ttgttgCGGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGAt                                                                                                                  <  6:91544/148‑1 (MQ=255)                    cTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATa                                                                                                           <  7:151777/149‑1 (MQ=255)                     tGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAg                                                                                                          >  1:226935/1‑149 (MQ=255)                     tGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAg                                                                                                          >  8:135108/1‑149 (MQ=255)                       gTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGTAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTTAAGGCGATGCAGTTGTGTCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATa                                                                                                           <  5:232314/146‑1 (MQ=255)                       gTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATgg                                                                                                                      >  4:321796/1‑135 (MQ=255)                       gTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATgg                                                                                                                      <  3:321796/135‑1 (MQ=255)                                 cTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTgcagca                                                                                              >  1:289926/1‑149 (MQ=255)                                  tttGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTgcagca                                                                                              >  6:338413/1‑148 (MQ=255)                                    tGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATa                                                                                            <  2:338883/148‑1 (MQ=255)                                      aTTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGa                                                                                          <  8:79636/148‑1 (MQ=255)                                       ttGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTgca                                                                                                 <  4:104091/140‑1 (MQ=255)                                       ttGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTgca                                                                                                 >  3:104091/1‑140 (MQ=255)                                          cAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGc                                                                                     >  1:132142/1‑149 (MQ=255)                                          cAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGc                                                                                     <  8:82089/149‑1 (MQ=255)                                           aaCCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTg                                                                                                   <  2:318628/134‑1 (MQ=255)                                           aaCCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTg                                                                                                   >  1:318628/1‑134 (MQ=255)                                               tCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                >  3:298350/1‑149 (MQ=255)                                               tCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                >  1:354847/1‑149 (MQ=255)                                               tCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                >  6:327982/1‑149 (MQ=255)                                                 aaGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                <  3:121720/147‑1 (MQ=255)                                                 aaGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCgtgt                                                                                <  4:337857/147‑1 (MQ=255)                                                 aaGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGc                                                                              <  2:354847/149‑1 (MQ=255)                                                 aaGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGc                                                                              <  5:327982/149‑1 (MQ=255)                                                  aGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCt                                                                             <  2:132142/149‑1 (MQ=255)                                                     gCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCgaga                                                                                                             <  7:152114/114‑1 (MQ=255)                                                     gCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCgaga                                                                                                             >  8:152114/1‑114 (MQ=255)                                                            cACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAgg                                                                   <  8:300880/149‑1 (MQ=255)                                                                 tGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCAc                                                              <  4:171529/149‑1 (MQ=255)                                                                 tGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCAc                                                              <  8:96507/149‑1 (MQ=255)                                                                    gTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGc                                                           >  3:703/1‑149 (MQ=255)                                                                     tGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATg                                                                                                                       >  1:315037/1‑88 (MQ=255)                                                                     tGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATg                                                                                                                       <  2:315037/88‑1 (MQ=255)                                                                                 ggTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCg                                              <  5:338413/149‑1 (MQ=255)                                                                                      tAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGctct                                          >  4:277287/1‑148 (MQ=255)                                                                                       aaTGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCtt                                         >  1:317950/1‑148 (MQ=255)                                                                                        aTGCTCAAGCAATGTGCAGGCGATGCAGGTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTc                                        <  6:307396/148‑1 (MQ=255)                                                                                          gCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGccac                                                        <  7:98080/130‑1 (MQ=255)                                                                                          gCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGccac                                                        >  8:98080/1‑130 (MQ=255)                                                                                              aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                 >  5:213434/1‑149 (MQ=255)                                                                                              aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                 >  1:227985/1‑149 (MQ=255)                                                                                              aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                 <  5:173352/149‑1 (MQ=255)                                                                                              aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaac                                 <  2:289926/149‑1 (MQ=255)                                                                                              aagcaagGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCaccaaa                                  <  2:317950/148‑1 (MQ=255)                                                                                                          ggCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATgg                     <  7:135108/149‑1 (MQ=255)                                                                                                           gCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGc                    >  6:254119/1‑149 (MQ=255)                                                                                                              aTGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAg                 <  3:277287/149‑1 (MQ=255)                                                                                                               tGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAgg                <  2:227985/149‑1 (MQ=255)                                                                                                                gCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTc                                        >  6:99899/1‑124 (MQ=255)                                                                                                                gCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTc                                        <  5:99899/124‑1 (MQ=255)                                                                                                                  aGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCg             <  4:298350/149‑1 (MQ=255)                                                                                                                    ttGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGAt           <  5:122789/149‑1 (MQ=255)                                                                                                                      gtgGCCTGCCAGTTCGGCGGGCTCGCGTGGCTggccacaactgcatcgccttcaccttgcttgagcattacgaccgc                                                                                 >  3:274377‑M2/1‑32 (MQ=255)                                                                                                                       tgGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGtt        <  4:703/149‑1 (MQ=255)                                                                                                                        ggCCTGCCAGTTCGGCGGGCTCGCGTGGCTggccacaactgcatcgccttcaccttgcttgagcattacgaccgctggcacttcacccatcgtggcgaagcacttgaggttgcaatcaaaggcaacgtcacc                        >  2:215527‑M2/1‑30 (MQ=255)                                                                                                                        ggCCTGCCAGTTCGGCGGGCTCGCGTGGCTggccacaactgcatcgccttcaccttgcttgagcattacgaccgctggcacttcacccatcgtggcgaagcacttgaggttgcaatcaaaggcaacgtcacc                        <  1:215527‑M2/132‑103 (MQ=255)                                                                                                                         gCCTGCCAGTTCGGCGGGCTCGCGTGGCTggccacaactgcatcgccttcaccttgcttgagcattacgaccgctggcacttcacccatcgtggcgaagcacttgaggttgcaatcaaa                                    >  2:193056‑M2/1‑29 (MQ=255)                                                                                                                         gCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTTGTTCACAGTGGCACGGCCACCAGCACCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGttt       <  2:226935/148‑1 (MQ=255)                                                                                                                         gCCTGCCAGTTCGGCGGGCTCGCGTGACTggccacaactgcatcgccttcaccttgcttgagcattacgaccgctggcacttcacccatcgtggcgaagcacttgaggttgcaatcaaa                                    <  1:193056‑M2/119‑91 (MQ=255)                                                                                                                              ccAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCAt  <  6:213434/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                             AATGGCCTCGCTGTTGTTGCTGGTGACGTTGCCTTTGATTGCAACCTCAAGTGCTTCGCCACGATGGGTGAAGTGCCAGCGGTCGTAATGCTCAAGCAAGGTGAAGGCGATGCAGTTGTGGCCTGCCAGTTCGGCGGGCTCGCGTGGCTGGCCATGGCGATCGAGATAGGCCGGTGCAGCATAGACTCGCCGTGTGCTGGTGCCCAGGGGCACGGCCACCAGCCCCTCGCTCTTCACCAAACCAATGCGGATGGCCAGGTCGATGTTTTCCAT  >  NC_002947/3364548‑3364820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.