New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3750698	51 (0.900)	6 (0.110)	5/250	NT	9.7%	coding (302/471 nt)	PP_3315	membrane protein
	?	NC_002947	= 3750761	62 (1.130)					coding (239/471 nt)	PP_3315	membrane protein

GCCGGGCTGACATCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGAAAGAATGTGA  >  NC_002947/3750614‑3750904                                                                                                                                                    |                                                                                                                                                gCCGGGCTGACATCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGt                                                                                                                                                <  4:335457‑M2/149‑2 (MQ=255)  ccGGGCTGACATCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtc                                                                                                                                               >  4:113649‑M2/1‑147 (MQ=255)       cTGACATCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGAc                                                                                                                                          <  3:145627/149‑1 (MQ=255)          aCATCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGAcc                                                                                                                                         <  6:322949/147‑1 (MQ=255)            aTCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATAc                                                                                                                                     <  7:258780/149‑1 (MQ=255)             tCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATAcc                                                                                                                                    <  7:2603/149‑1 (MQ=255)                      aGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACAtt                                                                                                                           >  6:356824/1‑149 (MQ=255)                       ggATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTc                                                                                                                          >  6:185892/1‑149 (MQ=255)                                  ttGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCg                                                                                                               >  5:321933/1‑149 (MQ=255)                                    gcgcGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCg                                                                                                               <  6:321933/147‑1 (MQ=255)                                     cgcgACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCggtg                                                                                                            <  5:101108/149‑1 (MQ=255)                                      gcgACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCggtgg                                                                                                           >  4:71962/1‑149 (MQ=255)                                      gcgACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGGCATGACCATACCGAACACATTCTGGAAGATCCggtgg                                                                                                           >  4:15003/1‑149 (MQ=255)                                           aGCGCGATCAACCCGATCAATAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACTATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCgg                                                                                                              <  3:234310/141‑1 (MQ=255)                                             cgcgATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCg                                                                                                    >  6:96113/1‑149 (MQ=255)                                                gATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGAt                                                                                                 >  3:202027/1‑149 (MQ=255)                                                gATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGAt                                                                                                 >  3:162088/1‑149 (MQ=255)                                                gATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGAt                                                                                                 >  3:84541/1‑149 (MQ=255)                                                 aTCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGAtt                                                                                                >  2:29454/1‑149 (MQ=255)                                                  tCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTg                                                                                               <  5:356824/149‑1 (MQ=255)                                                    aaCCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGaa                                                                                             <  3:335457/149‑1 (MQ=255)                                                     aCCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATa                                                                                                                                      <  1:265810/107‑1 (MQ=255)                                                     aCCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATa                                                                                                                                      >  2:265810/1‑107 (MQ=255)                                                      cccGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCggtg                                                                                                            >  3:167492/1‑132 (MQ=255)                                                      cccGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCggtg                                                                                                            <  4:167492/132‑1 (MQ=255)                                                               gagGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGa                                                                                                  <  2:92619/133‑1 (MQ=255)                                                               gagGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGa                                                                                                  >  1:92619/1‑133 (MQ=255)                                                               gagGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCgatga                                                                                  >  5:64353/1‑149 (MQ=255)                                                                 ggACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCCGTGGTCCAGCGGATTGAACGCATCgatgat                                                                                 <  1:29454/148‑1 (MQ=255)                                                                            aCCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGAtt                                                                                                <  2:117742/122‑1 (MQ=255)                                                                            aCCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGAtt                                                                                                >  1:117742/1‑122 (MQ=255)                                                                            aCCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGaa                                                                     <  5:185892/149‑1 (MQ=255)                                                                             ccTGAATGATGCTGCAATGGCGCAAGACAACGCGTACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGaa                                                                     <  5:339574/148‑1 (MQ=255)                                                                              cTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtcattcaggtcaagacggtcctcttgatcgggttgatcgcgctgtcgcgcaagatcgtgatccttgatcccgatgt                                                                     <  4:226550‑M2/147‑77 (MQ=255)                                                                              cTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtcattcaggtcaagacggtcctcttgatcgggttgatcgcgctgtcgcgcaagatcgtgatccttgatcccgat                                                                       >  2:181237‑M2/1‑71 (MQ=255)                                                                              cTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtcattcaggtcaagacggtcctcttgatcgggttgatcgcgctgtcgcgcaagatcgtgatccttgatcccgat                                                                       <  1:181237‑M2/145‑75 (MQ=255)                                                                              cTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCggt                                                                                                             <  1:158853/107‑1 (MQ=255)                                                                              cTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCggt                                                                                                             >  2:158853/1‑107 (MQ=255)                                                                                 aaTGATGCTTCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTa                                                                <  8:301665/149‑1 (MQ=255)                                                                                 aaTGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTa                                                                >  4:210137/1‑149 (MQ=255)                                                                                   tgatgCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtcattcaggtcaagacggtcctcttgatcgggttgatcgcgctgtcgcgcaagatcgtgatccttgatcccgatgtcagcccg                                                              <  2:30775‑M2/149‑84 (MQ=255)                                                                                     atgCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCt                                                             <  6:64353/148‑1 (MQ=255)                                                                                     atgCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCt                                                             <  4:202027/148‑1 (MQ=255)                                                                                     atgCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCt                                                             <  5:153119/148‑1 (MQ=255)                                                                                      tgctgcCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTgg                                                           <  5:96113/149‑1 (MQ=255)                                                                                        ctgcCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGAt                                                         <  8:287614/149‑1 (MQ=255)                                                                                        ctgcCAGGGCGCAAGACAACGCCCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACAATCTGGAATATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGAt                                                         <  4:185144/149‑1 (MQ=255)                                                                                         tgcCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCGACAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGc                                                                                          >  1:94030/1‑115 (MQ=255)                                                                                         tgcCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGc                                                                                          <  2:94030/115‑1 (MQ=255)                                                                                           ccATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtcattcaggtcaagacggtcctcttgatcgggttgatcgcgctgtcgcgcaagatcgtgatccttgatcccgatgtcagcccggccaaa                                                        >  1:30775‑M2/1‑58 (MQ=255)                                                                                                  gcAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATcagc                                                                             >  4:48449/1‑119 (MQ=255)                                                                                                  gcAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATcagc                                                                             <  3:48449/119‑1 (MQ=255)                                                                                                        cAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGtcattcaggtcaagacggtcctcttgatcgggttgatcgcgctgtcgcgcaagatcgtgatccttgatcccgatgtcagcccggccaaagtcgcggcgctcgct                                         >  3:226550‑M2/1‑45 (MQ=255)                                                                                                         aaCGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGaca                                        >  3:191380/1‑149 (MQ=255)                                                                                                              gcACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCt                                                    >  1:305151/1‑132 (MQ=255)                                                                                                              gcACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCt                                                    <  2:305151/132‑1 (MQ=255)                                                                                                                 cGATGGAATTCAAGCATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGAt                                 >  4:244705/1‑148 (MQ=255)                                                                                                                   aTGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAac                              >  3:324024/1‑149 (MQ=255)                                                                                                                           cTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATa                                >  8:110821/1‑139 (MQ=255)                                                                                                                           cTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATa                                <  7:110821/139‑1 (MQ=255)                                                                                                                            ttGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGAt                     >  3:314371/1‑149 (MQ=255)                                                                                                                                 ttCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCa                <  4:191380/149‑1 (MQ=255)                                                                                                                                   ccATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAg               <  3:71962/148‑1 (MQ=255)                                                                                                                                   ccATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAg               <  3:15003/148‑1 (MQ=255)                                                                                                                                    cATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGc              >  7:181629/1‑148 (MQ=255)                                                                                                                                        gcgATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGaaa          <  4:162088/148‑1 (MQ=255)                                                                                                                                           aTCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGAAAGAAt      <  3:210137/149‑1 (MQ=255)                                                                                                                                            tCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGAc                                                                  >  1:304058/1‑88 (MQ=255)                                                                                                                                            tCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGAc                                                                  <  2:304058/88‑1 (MQ=255)                                                                                                                                               gcagcGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGAAAGAAtgt    >  2:172009/1‑147 (MQ=255)                                                                                                                                               gcagcGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGAAAGAATGTGa  <  2:302793/149‑1 (MQ=255)                                                                                                                                               gcagcGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGAAAGAATGTGa  <  4:324024/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                GCCGGGCTGACATCGGGATCAAGGATCACGATCTTGCGCGACAGCGCGATCAACCCGATCAAGAGGACCGTCTTGACCTGAATGATGCTGCCATGGCGCAAGACAACGCGCACGATGGAATGCTTGAATTCCATCGCGATCAGCAGCGTCATGACCATACCGAACACATTCTGGAAGATCCGGTGGTCCAGCGGATTGAACGCATCGATGATCAGCAGGCTGAAGACTATCTGGATCAGCTGTACCAGCGACACCACGATAACCACCGCGATCACCAGCGAAAGAATGTGA  >  NC_002947/3750614‑3750904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.